myRT

myRT report for GCA_002253625.1_ASM225362v1

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Seq: NGPB01000026.1 Lactobacillus reuteri strain 609i 609i_26, whole genome shotgun sequence (27189 bp)
Overview 1 RT 1: 23028-27065 bp Neighborhood of RT #1 [23028, 27189] PRK05425 asnC RVT-GII GIIM Feature: gene Location: 23028-24038 bp Feature: domain Description: PRK05425 Location: 23055-24036 bp Feature: domain Description: PRK05425 Location: 23055-24036 bp Feature: gene Location: 24058-25356 bp Feature: domain Description: asnC Location: 24073-25351 bp Feature: domain Description: asnC Location: 24073-25351 bp Feature: gene Location: 25847-27189 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26165-26783 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 261 65-26783 bp Feature: domain Description: GIIM Note: maturase Location: 26837-27065 bp Feature: domain Description: GIIM Note: maturase Location: 26837-27065 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05425 (asparagine synthetase AsnA; Provisional), asnC (PRK03932), RVT-GII, GIIM (pfam08388)

Seq: NGPB01000013.1 Lactobacillus reuteri strain 609i 609i_13, whole genome shotgun sequence (61583 bp)
Overview 1 RT 1: 57603-61459 bp Neighborhood of RT #1 [57603, 61583] PRK08068 PanE RVT-GII GIIM Feature: gene Location: 57603-58781 bp Feature: domain Description: PRK08068 Location: 57606-58776 bp Feature: domain Description: PRK08068 Location: 57606-58776 bp Feature: gene Location: 58795-59760 bp Feature: domain Description: PanE Location: 58807-59746 bp Feature: domain Description: PanE Location: 58807-59746 bp Feature: gene Location: 60241-61583 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60559-61177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60559-61177 bp Feature: domain Description: GIIM Note: maturase Location: 61231-61459 bp Feature: domain Description: GIIM Note: maturase Location: 612 31-61459 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK08068 (transaminase; Reviewed), PanE (COG1893), RVT-GII, GIIM (pfam08388)

Seq: NGPB01000088.1 Lactobacillus reuteri strain 609i 609i_88, whole genome shotgun sequence (638 bp)
Overview 1 RT 1: 1-514 bp Neighborhood of RT #1 [1, 638] RVT-GII GIIM Feature: gene Location: 1-638 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-232 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-23 2 bp Feature: domain Description: GIIM Note: maturase Location: 286-514 bp Feature: domain Description: GIIM Note: maturase Location: 286-514 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NGPB01000030.1 Lactobacillus reuteri strain 609i 609i_30, whole genome shotgun sequence (20002 bp)
Overview 1 RT 1: 17029-19878 bp Neighborhood of RT #1 [17029, 20002] OpuBB PRK14018 RVT-GII GIIM Feature: gene Location: 17029-17667 bp Feature: domain Description: OpuBB Location: 17038-17641 bp Feature: domain Description: OpuBB Location: 17038-1764 1 bp Feature: gene Location: 17739-18167 bp Feature: domain Description: PRK14018 Location: 17745-18153 bp Feature: domain Description: PRK14 018 Location: 1774 5-18153 bp Feature: gene Location: 18660-20002 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18978-19596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18978-19596 bp Feature: domain Description: GIIM Note: maturase Location: 19650-19878 bp Feature: domain Description: GIIM Note: maturase Location: 19650-19878 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT OpuBB (COG1174), PRK14018 (bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB), RVT-GII, GIIM (pfam08388)

Seq: NGPB01000091.1 Lactobacillus reuteri strain 609i 609i_91, whole genome shotgun sequence (545 bp)
Overview 1 RT 1: 34-544 bp Neighborhood of RT #1 [34, 545] RVT-GII Feature: gene Location: 34-545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 313-544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 313-5 44 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NGPB01000084.1 Lactobacillus reuteri strain 609i 609i_84, whole genome shotgun sequence (673 bp)
Overview 1 RT 1: 34-670 bp Neighborhood of RT #1 [34, 673] RVT-GII Feature: gene Location: 34-673 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 313-670 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 313-6 70 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NGPB01000069.1 Lactobacillus reuteri strain 609i 609i_69, whole genome shotgun sequence (1791 bp)
Overview 1 RT 1: 449-1667 bp Neighborhood of RT #1 [449, 1791] RVT-GII GIIM Feature: gene Location: 449-1791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 767-1385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7 67 -1385 bp Feature: domain Description: GIIM Note: maturase Location: 1439-1667 bp Feature: domain Description: GIIM Note: maturase Location: 1439-1667 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NGPB01000043.1 Lactobacillus reuteri strain 609i 609i_43, whole genome shotgun sequence (7916 bp)
Overview 1 RT 1: 1-3665 bp Neighborhood of RT #1 [1, 3679] RVT-GII LysR PRK05222 Feature: gene Location: 1-264 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-187 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-18 7 bp Feature: gene Location: 347-1285 bp Feature: domain Description: LysR Location: 350-1247 bp Feature: domain Description: LysR Location: 350-1247 bp Feature: gene Location: 1415-3679 bp Feature: domain Description: PRK05222 Location: 1421-3665 bp Feature: domain Description: PRK05222 Location: 1421-3665 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK05222 (5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; Provisional), LysR (COG0583)

Seq: NGPB01000029.1 Lactobacillus reuteri strain 609i 609i_29, whole genome shotgun sequence (20388 bp)
Overview 1 RT 1: 15791-20264 bp Neighborhood of RT #1 [15791, 20388] Tex PRK04351 RVT-GII GIIM Feature: gene Location: 15791-17968 bp Feature: domain Description: Tex Location: 15800-17951 bp Feature: domain Description: Tex Location: 15800-179 51 bp Feature: gene Location: 17961-18413 bp Feature: domain Description: PRK04351 Location: 17964-18408 bp Feature: domain Description: PRK04351 Location: 179 64-18408 bp Feature: gene Location: 19046-20388 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19364-19982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19 364-19 9 82 bp Feature: domain Description: GIIM Note: maturase Location: 20036-20264 bp Feature: domain Description: GIIM Note: maturase Location: 20036-20264 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tex (COG2183), PRK04351 (SprT family protein), RVT-GII, GIIM (pfam08388)

Seq: NGPB01000079.1 Lactobacillus reuteri strain 609i 609i_79, whole genome shotgun sequence (826 bp)
Overview 1 RT 1: 1-826 bp Neighborhood of RT #1 [1, 826] RVT-GII Feature: gene Location: 1-826 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 313-826 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 313-826 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII