myRT

myRT report for GCA_002253955.1_ASM225395v1

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Seq: NGPS01000110.1 Lactobacillus reuteri strain 107j 107j_112, whole genome shotgun sequence (100099 bp)
Overview 1 RT 1: 1-3190 bp Neighborhood of RT #1 [1, 3228] RVT-GII rplS 2A0306 Feature: gene Location: 1-832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 319-832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 9-832 bp Feature: gene Location: 1316-1675 bp Feature: domain Description: rplS Location: 1328-1667 bp Feature: domain Description: rplS Location: 1 328-1 667 bp Feature: gene Location: 1798-3228 bp Feature: domain Description: 2A0306 Location: 1882-3190 bp Feature: domain Description: 2A0306 Location: 1 882-31 90 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rplS (PRK05338), 2A0306 (TIGR00909), RVT-GII

Seq: NGPS01000085.1 Lactobacillus reuteri strain 107j 107j_87, whole genome shotgun sequence (17835 bp)
Overview 1 RT 1: 1-2790 bp Neighborhood of RT #1 [1, 2870] RVT-GII GH25_LysA-like SH3b Phage_holin_4_1 Feature: gene Location: 1-832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 319-832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 319-832 bp Feature: gene Location: 1525-2436 bp Feature: domain Description: GH25_LysA-like Location: 1531-2089 bp Feature: domain Description: GH2 5_LysA-like Location: 1531-2 089 bp Feature: domain Description: SH3b Location: 2224-2401 bp Feature: domain Description: SH3b Location: 2 2 2 4-2 401 bp Feature: gene Location: 2436-2870 bp Feature: domain Description: Phage_holin_4_1 Location: 2484-2790 bp Feature: domain Description: Phage_holin_4_1 Location: 2 484-2 790 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GH25_LysA-like (cd06417), SH3b (smart00287), RVT-GII, Phage_holin_4_1 (pfam05105)

Seq: NGPS01000067.1 Lactobacillus reuteri strain 107j 107j_69, whole genome shotgun sequence (33943 bp)
Overview 1 RT 1: 30299-33940 bp Neighborhood of RT #1 [30299, 33943] YciA PGM2 RVT-GII Feature: gene Location: 30299-30805 bp Feature: domain Description: YciA Location: 30314-30755 bp Feature: domain Description: YciA Location: 3 03 14-3 0755 bp Feature: gene Location: 30895-32622 bp Feature: domain Description: PGM2 Location: 31018-32596 bp Feature: domain Description: PGM2 Location: 3 1018-3 2596 bp Feature: gene Location: 33112-33943 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33430-33940 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 3 43 0-3 3 940 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YciA (COG1607), PGM2 (cd05799), RVT-GII

Seq: NGPS01000076.1 Lactobacillus reuteri strain 107j 107j_78, whole genome shotgun sequence (25355 bp)
Overview 1 RT 1: 1-2230 bp 2 RT 2: 21500-25355 bp Neighborhood of RT #1 [1, 2230] RVT-GII HTH_XRE Neighborhood of RT #2 [21500, 25355] MdoB RVT-GII Feature: gene Location: 1-832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 319-832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 319-832 bp Feature: gene Location: 1312-1866 bp Feature: domain Description: HTH_XRE Location: 1315-1435 bp Feature: domain Description: HTH_XRE Location: 1315-14 35 bp Feature: gene Location: 1910-2230 bp Feature: gene Location: 21500-21763 bp Feature: gene Location: 21889-24018 bp Feature: domain Description: MdoB Location: 21901-23827 bp Feature: domain Description: MdoB Location: 21901-23827 bp Feature: gene Location: 24524-25355 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24842-25355 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24 84 2-25355 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-GII, MdoB (COG1368)

Seq: NGPS01000074.1 Lactobacillus reuteri strain 107j 107j_76, whole genome shotgun sequence (26106 bp)
Overview 1 RT 1: 1-3998 bp Neighborhood of RT #1 [1, 4006] RVT-GII PRK05273 SpoT Feature: gene Location: 1-832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 319-832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 319-832 bp Feature: gene Location: 1321-1758 bp Feature: domain Description: PRK05273 Location: 1327-1753 bp Feature: domain Description: PRK05 273 Location: 1327-175 3 bp Feature: gene Location: 1769-4006 bp Feature: domain Description: SpoT Location: 1775-3998 bp Feature: domain Description: SpoT Location: 1775 -3998 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05273 (D-tyrosyl-tRNA(Tyr) deacylase; Provisional), SpoT (COG0317), RVT-GII

Seq: NGPS01000001.1 Lactobacillus reuteri strain 107j 107j_1, whole genome shotgun sequence (1277 bp)
Overview 1 RT 1: 1-832 bp Neighborhood of RT #1 [1, 832] RVT-GII Feature: gene Location: 1-832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 319-832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 319-832 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NGPS01000068.1 Lactobacillus reuteri strain 107j 107j_70, whole genome shotgun sequence (33482 bp)
Overview 1 RT 1: 5-3269 bp Neighborhood of RT #1 [5, 4467] RVT-GII PRK10746 EriC Feature: gene Location: 5-832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 323-830 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 323-830 bp Feature: gene Location: 1454-2836 bp Feature: domain Description: PRK10746 Location: 1457-2810 bp Feature: domain Description: PRK107 46 Location: 1457 -2810 bp Feature: gene Location: 2954-4467 bp Feature: domain Description: EriC Location: 3023-3269 bp Feature: domain Description: EriC Location: 3023-3269 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10746 (putative transport protein YifK; Provisional), EriC (cd01031), RVT-GII

Seq: NGPS01000109.1 Lactobacillus reuteri strain 107j 107j_111, whole genome shotgun sequence (7872 bp)
Overview 1 RT 1: 1-1912 bp Neighborhood of RT #1 [1, 1923] RVT-GII PemK_toxin RelB_DinJ Feature: gene Location: 1-832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 319-832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 319-8 32 bp Feature: gene Location: 1317-1643 bp Feature: domain Description: PemK_toxin Location: 1368-1617 bp Feature: domain Description: PemK_toxin Location: 1368 -1617 bp Feature: gene Location: 1633-1923 bp Feature: domain Description: RelB_DinJ Location: 1666-1912 bp Feature: domain Description: RelB_DinJ Location: 1666-1912 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PemK_toxin (pfam02452), RelB_DinJ (TIGR02384), RVT-GII

Seq: NGPS01000083.1 Lactobacillus reuteri strain 107j 107j_85, whole genome shotgun sequence (19877 bp)
Overview 1 RT 1: 15791-19868 bp Neighborhood of RT #1 [15791, 19877] Tex PRK04351 RVT-GII Feature: gene Location: 15791-17968 bp Feature: domain Description: Tex Location: 15800-17951 bp Feature: domain Description: Tex Location: 15800-179 51 bp Feature: gene Location: 17961-18413 bp Feature: domain Description: PRK04351 Location: 17964-18408 bp Feature: domain Description: PRK04351 Location: 179 64-18408 bp Feature: gene Location: 19046-19877 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19364-19868 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19 364-19 868 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tex (COG2183), PRK04351 (SprT family protein), RVT-GII

Seq: NGPS01000091.1 Lactobacillus reuteri strain 107j 107j_93, whole genome shotgun sequence (15793 bp)
Overview 1 RT 1: 12533-15793 bp Neighborhood of RT #1 [12533, 15793] KOG4530 PDDH RVT-GII Feature: gene Location: 12533-13075 bp Feature: domain Description: KOG4530 Location: 12539-12953 bp Feature: domain Description: KOG4530 Location: 12539-12953 bp Feature: gene Location: 13294-14466 bp Feature: domain Description: PDDH Location: 13312-14443 bp Feature: domain Description: PDDH Location: 13312-14443 bp Feature: gene Location: 14962-15793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15280-15793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15280-15793 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG4530 (KOG4530, Predicted flavoprotein ), PDDH (cd08188), RVT-GII

Seq: NGPS01000022.1 Lactobacillus reuteri strain 107j 107j_22, whole genome shotgun sequence (61194 bp)
Overview 1 RT 1: 57725-61194 bp Neighborhood of RT #1 [57725, 61194] PRK08068 PanE RVT-GII Feature: gene Location: 57725-58903 bp Feature: domain Description: PRK08068 Location: 57728-58898 bp Feature: domain Description: PRK08068 Location: 57728-58898 bp Feature: gene Location: 58917-59882 bp Feature: domain Description: PanE Location: 58929-59868 bp Feature: domain Description: PanE Location: 58929-59868 bp Feature: gene Location: 60363-61194 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60681-61194 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60681-611 94 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK08068 (transaminase; Reviewed), PanE (COG1893), RVT-GII

Seq: NGPS01000024.1 Lactobacillus reuteri strain 107j 107j_24, whole genome shotgun sequence (638 bp)
Overview 1 RT 1: 7-514 bp Neighborhood of RT #1 [7, 638] RVT-GII GIIM Feature: gene Location: 7-638 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10-232 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10-232 bp Feature: domain Description: GIIM Note: maturase Location: 286-514 bp Feature: domain Description: GIIM Note: maturase Location: 286-514 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NGPS01000072.1 Lactobacillus reuteri strain 107j 107j_74, whole genome shotgun sequence (26752 bp)
Overview 1 RT 1: 23102-26749 bp Neighborhood of RT #1 [23102, 26752] PRK05425 asnC RVT-GII Feature: gene Location: 23102-24112 bp Feature: domain Description: PRK05425 Location: 23129-24110 bp Feature: domain Description: PRK05425 Location: 23129-24110 bp Feature: gene Location: 24132-25430 bp Feature: domain Description: asnC Location: 24147-25425 bp Feature: domain Description: asnC Location: 24147-25425 bp Feature: gene Location: 25921-26752 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26239-26749 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26239-26749 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05425 (asparagine synthetase AsnA; Provisional), asnC (PRK03932), RVT-GII