myRT

myRT report for GCA_002254095.1_ASM225409v1

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Seq: NGPU01000110.1 Lactobacillus reuteri strain 105w 105w_110, whole genome shotgun sequence (7214 bp)
Overview 1 RT 1: 1-2079 bp Neighborhood of RT #1 [1, 2087] DNA_pol3_beta_3 RVT-AbiP2 RVT-AbiP2 Doc doc_partner Feature: gene Location: 1-99 bp Feature: domain Description: DNA_pol3_beta_3 Location: 13-97 bp Feature: domain Description: DNA_pol3_beta_3 Location: 1 3-97 bp Feature: gene Location: 199-468 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 202-463 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 202-463 bp Feature: gene Location: 498-1190 bp Ori: OYS86026.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1026-1179 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1 026-1 1 79 bp Feature: gene Location: 1438-1833 bp Ori: OYS86027.1 Feature: domain Description: Doc Location: 1447-1822 bp Feature: domain Description: Doc Location: 1 447-1 822 bp Feature: gene Location: 1836-2087 bp Ori: OYS86028.1 Feature: domain Description: doc_partner Location: 1860-2079 bp Feature: domain Description: doc_partner Location: 1 860-2079 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DNA_pol3_beta_3 (pfam02768), RVT-AbiP2, Doc (COG3654), doc_partner (TIGR02609)

Seq: NGPU01000075.1 Lactobacillus reuteri strain 105w 105w_75, whole genome shotgun sequence (121374 bp)
Overview 1 RT 1: 60623-67492 bp Neighborhood of RT #1 [60623, 67503] COG4584 INT_ICEBs1_C_like RVT-GII GIIM thrS Feature: gene Location: 60623-61834 bp Feature: domain Description: COG4584 Location: 60653-61406 bp Feature: domain Description: COG4584 Location: 60653-61406 bp Feature: gene Location: 61899-62429 bp Ori: OYS87326.1 Feature: domain Description: INT_ICEBs1_C_like Location: 61941-62367 bp Feature: domain Description: INT_ICEBs1_C_like Location: 61941-62 367 bp Feature: gene Location: 62597-63979 bp Ori: OYS87327.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62915-63533 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62 915-63533 bp Feature: domain Description: GIIM Note: maturase Location: 63587-63815 bp Feature: domain Description: GIIM Note: maturase Location: 63587-63815 bp Feature: gene Location: 64689-65369 bp Feature: gene Location: 65698-67503 bp Ori: OYS87329.1 Feature: domain Description: thrS Location: 65719-67492 bp Feature: domain Description: thrS Location: 65719-67492 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4584 (Transposase ), INT_ICEBs1_C_like (cd01189), RVT-GII, GIIM (pfam08388), thrS (TIGR00418)

Seq: NGPU01000133.1 Lactobacillus reuteri strain 105w 105w_133, whole genome shotgun sequence (2751 bp)
Overview 1 RT 1: 26-2496 bp Neighborhood of RT #1 [26, 2507] RVT-GII GIIM galactose_mutarotase_like Feature: gene Location: 26-1369 bp Ori: OYS84847.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 305-923 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 05-923 bp Feature: domain Description: GIIM Note: maturase Location: 977-1205 bp Feature: domain Description: GIIM Note: maturase Location: 977-1205 bp Feature: gene Location: 1470-2507 bp Ori: OYS84846.1 Feature: domain Description: galactose_mutarotase_like Location: 1524-2496 bp Feature: domain Description: galactose_mutarotase_like Location: 1524-2496 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), galactose_mutarotase_like (cd09019)

Seq: NGPU01000119.1 Lactobacillus reuteri strain 105w 105w_119, whole genome shotgun sequence (74250 bp)
Overview 1 RT 1: 70553-74251 bp Neighborhood of RT #1 [70553, 74250] YciA PGM2 RVT-GII Feature: gene Location: 70553-71059 bp Ori: OYS85832.1 Feature: domain Description: YciA Location: 70574-71009 bp Feature: domain Description: YciA Location: 70574 -71009 bp Feature: gene Location: 71149-72876 bp Ori: OYS85833.1 Feature: domain Description: PGM2 Location: 71272-72850 bp Feature: domain Description: PGM2 Location: 71272-72850 bp Feature: gene Location: 73366-74250 bp Ori: OYS85834.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73684-74251 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73684 -74 251 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YciA (COG1607), PGM2 (cd05799), RVT-GII