myRT

myRT report for GCA_002254115.1_ASM225411v1

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Seq: NGPZ01000034.1 Lactobacillus reuteri strain 105i 105i_38, whole genome shotgun sequence (24997 bp)
Overview 1 RT 1: 1-3405 bp Neighborhood of RT #1 [1, 3422] RVT-GII MFS_LmrB_MDR_like Fur Feature: gene Location: 1-906 bp Ori: OYS97339.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 319-901 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 9-901 bp Feature: gene Location: 1404-2843 bp Ori: OYS97340.1 Feature: domain Description: MFS_LmrB_MDR_like Location: 1467-2814 bp Feature: domain Description: MFS_LmrB_MDR_like Location: 1 467-281 4 bp Feature: gene Location: 2967-3422 bp Ori: OYS97341.1 Feature: domain Description: Fur Location: 2991-3405 bp Feature: domain Description: Fur Location: 2991 -3405 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, MFS_LmrB_MDR_like (cd17503), Fur (COG0735)

Seq: NGPZ01000078.1 Lactobacillus reuteri strain 105i 105i_82, whole genome shotgun sequence (1353 bp)
Overview 1 RT 1: 1-901 bp Neighborhood of RT #1 [1, 906] RVT-GII Feature: gene Location: 1-906 bp Ori: OYS94471.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 319-901 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 319-901 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NGPZ01000019.1 Lactobacillus reuteri strain 105i 105i_23, whole genome shotgun sequence (47620 bp)
Overview 1 RT 1: 41576-47460 bp Neighborhood of RT #1 [41576, 47471] COG3464 RVT-AbiP2 group_II_RT_mat RVT-AbiP2 Doc Feature: gene Location: 41576-42655 bp Feature: gene Location: 42886-44212 bp Feature: domain Description: COG3464 Location: 42931-43990 bp Feature: domain Description: COG3 464 Location: 4293 1-43 990 bp Feature: gene Location: 44775-46106 bp Ori: OYS98593.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 44778-45039 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 44778-4503 9 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 45411-45558 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 45411-45558 bp Feature: gene Location: 46136-46828 bp Ori: OYS98594.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 46664-46817 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 46664-46817 bp Feature: gene Location: 47076-47471 bp Ori: OYS98595.1 Feature: domain Description: Doc Location: 47085-47460 bp Feature: domain Description: Doc Location: 47085-47460 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3464 (Transposase ), RVT-AbiP2, group_II_RT_mat (TIGR04416), Doc (COG3654)

Seq: NGPZ01000075.1 Lactobacillus reuteri strain 105i 105i_79, whole genome shotgun sequence (1506 bp)
Overview 1 RT 1: 1-898 bp Neighborhood of RT #1 [1, 906] RVT-GII Feature: gene Location: 1-906 bp Ori: OYS94559.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 319-898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 319-898 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NGPZ01000028.1 Lactobacillus reuteri strain 105i 105i_32, whole genome shotgun sequence (35649 bp)
Overview 1 RT 1: 31008-35400 bp Neighborhood of RT #1 [31008, 35564] SpoT PRK05273 RVT-GII GIIM Feature: gene Location: 31008-33245 bp Ori: OYS97562.1 Feature: domain Description: SpoT Location: 31014-33237 bp Feature: domain Description: SpoT Location: 31014-33237 bp Feature: gene Location: 33256-33693 bp Ori: OYS97563.1 Feature: domain Description: PRK05273 Location: 33262-33688 bp Feature: domain Description: PRK05 273 Location: 33262-33688 bp Feature: gene Location: 34182-35564 bp Ori: OYS97564.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34500-35118 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 345 00-35 118 bp Feature: domain Description: GIIM Note: maturase Location: 35172-35400 bp Feature: domain Description: GIIM Note: maturase Location: 35 172-35 400 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SpoT (COG0317), PRK05273 (D-tyrosyl-tRNA(Tyr) deacylase; Provisional), RVT-GII, GIIM (pfam08388)

Seq: NGPZ01000038.1 Lactobacillus reuteri strain 105i 105i_42, whole genome shotgun sequence (20902 bp)
Overview 1 RT 1: 4037-10618 bp Neighborhood of RT #1 [4037, 10632] DacC RVT-GII LysR PRK05222 Feature: gene Location: 4037-5281 bp Ori: OYS96827.1 Feature: domain Description: DacC Location: 4073-5279 bp Feature: domain Description: DacC Location: 4073-5279 bp Feature: gene Location: 5458-5898 bp Feature: gene Location: 6402-7217 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6720-7134 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6 720-7134 bp Feature: gene Location: 7300-8238 bp Ori: OYS96829.1 Feature: domain Description: LysR Location: 7303-8200 bp Feature: domain Description: LysR Location: 7303-8200 bp Feature: gene Location: 8368-10632 bp Ori: OYS96830.1 Feature: domain Description: PRK05222 Location: 8374-10618 bp Feature: domain Description: PRK05222 Location: 8374-106 18 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DacC (COG1686), RVT-GII, LysR (COG0583), PRK05222 (5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; Provisional)

Seq: NGPZ01000055.1 Lactobacillus reuteri strain 105i 105i_59, whole genome shotgun sequence (5368 bp)
Overview 1 RT 1: 1-2419 bp Neighborhood of RT #1 [1, 2419] RVT-GII GIIM galactose_mutarotase_like Feature: gene Location: 1-948 bp Ori: OYS95840.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-502 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-502 bp Feature: domain Description: GIIM Note: maturase Location: 556-784 bp Feature: domain Description: GIIM Note: maturase Location: 556-7 84 bp Feature: gene Location: 1049-2086 bp Ori: OYS95841.1 Feature: domain Description: galactose_mutarotase_like Location: 1103-2075 bp Feature: domain Description: galactose_mutarotase_like Location: 1103-207 5 bp Feature: gene Location: 2204-2419 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), galactose_mutarotase_like (cd09019)

Seq: NGPZ01000064.1 Lactobacillus reuteri strain 105i 105i_68, whole genome shotgun sequence (2427 bp)
Overview 1 RT 1: 1-901 bp Neighborhood of RT #1 [1, 906] RVT-GII Feature: gene Location: 1-906 bp Ori: OYS95245.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 319-901 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 319-901 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII