myRT

myRT report for GCA_002255305.1_ASM225530v1

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Seq: NCBC01000356.1 Acidithiobacillus ferrivorans isolate 21-59-9 04302015_21_scaffold_8802, whole genome shotgun sequence (3041 bp)
Overview 1 RT 1: 224-2634 bp Neighborhood of RT #1 [224, 2720] InsE RVT-GII GIIM Feature: gene Location: 224-957 bp Feature: domain Description: InsE Location: 233-536 bp Feature: domain Description: InsE Location: 233-536 bp Feature: gene Location: 1132-1482 bp Feature: gene Location: 1479-2720 bp Ori: OYV78486.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1677-2334 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 677-2334 bp Feature: domain Description: GIIM Note: maturase Location: 2412-2634 bp Feature: domain Description: GIIM Note: maturase Location: 241 2-2634 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-GII, GIIM (pfam08388)

Seq: NCBC01000830.1 Acidithiobacillus ferrivorans isolate 21-59-9 04302015_21_scaffold_29641, whole genome shotgun sequence (1159 bp)
Overview 1 RT 1: 1-667 bp Neighborhood of RT #1 [1, 672] RVT-GII Feature: gene Location: 1-672 bp Ori: OYV72603.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 352-667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 352 -667 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NCBC01000927.1 Acidithiobacillus ferrivorans isolate 21-59-9 04302015_21_scaffold_34622, whole genome shotgun sequence (1063 bp)
Overview 1 RT 1: 123-1050 bp Neighborhood of RT #1 [123, 1063] RVT-GII Feature: gene Location: 123-1063 bp Ori: OYV72068.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 432-1050 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43 2-1050 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NCBC01000744.1 Acidithiobacillus ferrivorans isolate 21-59-9 04302015_21_scaffold_24792, whole genome shotgun sequence (1278 bp)
Overview 1 RT 1: 253-1180 bp Neighborhood of RT #1 [253, 1278] RVT-GII Feature: gene Location: 253-1278 bp Ori: OYV73144.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 562-1180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 562-1180 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NCBC01000582.1 Acidithiobacillus ferrivorans isolate 21-59-9 04302015_21_scaffold_17644, whole genome shotgun sequence (3028 bp)
Overview 1 RT 1: 250-2845 bp Neighborhood of RT #1 [250, 2871] HTH_Tnp_1 TnpB_IS66 LZ_Tnp_IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII Feature: gene Location: 250-753 bp Ori: OYV74306.1 Feature: domain Description: HTH_Tnp_1 Location: 295-475 bp Feature: domain Description: HTH_Tnp_1 Location: 295 -475 bp Feature: domain Description: TnpB_IS66 Location: 511-715 bp Feature: domain Description: TnpB_IS66 Location: 5 11-715 bp Feature: gene Location: 803-2464 bp Ori: OYV74308.1 Feature: domain Description: LZ_Tnp_IS66 Location: 977-1115 bp Feature: domain Description: LZ_Tnp_IS66 Location: 977-1115 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1418-2270 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1418-2270 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2291-2399 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2291-2399 bp Feature: gene Location: 2482-2871 bp Ori: OYV74307.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2485-2845 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2485 -2845 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_1 (pfam01527), TnpB_IS66 (pfam05717), LZ_Tnp_IS66 (pfam13007), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT-GII

Seq: NCBC01000932.1 Acidithiobacillus ferrivorans isolate 21-59-9 04302015_21_scaffold_34877, whole genome shotgun sequence (1058 bp)
Overview 1 RT 1: 56-1054 bp Neighborhood of RT #1 [56, 1058] RVT-GII Feature: gene Location: 56-274 bp Feature: gene Location: 577-1058 bp Ori: OYV72042.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 835-1054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 835-1054 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII