myRT

myRT report for GCA_002256245.1_ASM225624v1

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Seq: NKIU01000015.1 Pseudorhodobacter sp. PARRP1 NODE_640, whole genome shotgun sequence (53564 bp)
Overview 1 RT 1: 10381-22880 bp Neighborhood of RT #1 [10381, 22903] DUF4011 DEXXQc_SF1 DEXXQc_SF1 KOG1803 MTES_1575 DUF3320 nitrilase RVT-UG6 dnaG sbcB Feature: gene Location: 10381-15087 bp Ori: OYU37592.1 Feature: domain Description: DUF4011 Location: 10438-10969 bp Feature: domain Description: DUF401 1 Location: 1 0438-1 0969 bp Feature: domain Description: DEXXQc_SF1 Location: 11305-11590 bp Feature: domain Description: DEXXQc_SF1 Location: 1 1 305-1 1 590 bp Feature: domain Description: DEXXQc_SF1 Location: 12709-13486 bp Feature: domain Description: DEXXQc_SF1 Location: 1 2709-1 3486 bp Feature: domain Description: KOG1803 Location: 13642-14008 bp Feature: domain Description: KOG1 803 Location: 1 3642-1 4008 bp Feature: domain Description: MTES_1575 Location: 14167-14458 bp Feature: domain Description: MTES_1 575 Location: 1 41 67-1 4458 bp Feature: domain Description: DUF3320 Location: 14635-14773 bp Feature: domain Description: DUF3320 Location: 1 4635-1 4773 bp Feature: gene Location: 16137-17066 bp Ori: OYU37593.1 Feature: domain Description: nitrilase Location: 16392-16896 bp Feature: domain Description: nitrilase Location: 1 6392-1 6896 bp Feature: gene Location: 17038-19755 bp Ori: OYU37594.1 Feature: RT Description: RVT-UG6 Note: UG6 RT Location: 17146-17581 bp Feature: RT Description: RVT-UG6 Note: UG6 RT Location: 1 71 46-1 7581 bp Feature: gene Location: 20289-21386 bp Ori: OYU37595.1 Feature: domain Description: dnaG Location: 20421-21369 bp Feature: domain Description: dnaG Location: 20421 -21 369 bp Feature: gene Location: 21521-22903 bp Ori: OYU37596.1 Feature: domain Description: sbcB Note: exonuclease Location: 21527-22880 bp Feature: domain Description: sbcB Note: exonuclease Location: 21 527-22880 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4011 (pfam13195), DEXXQc_SF1 (cd18043), KOG1803 (KOG1803, DNA helicase ), MTES_1575 (pfam18741), DUF3320 (pfam11784), nitrilase (cl11424), RVT-UG6, dnaG (TIGR01391), sbcB (PRK11779)

Seq: NKIU01000001.1 Pseudorhodobacter sp. PARRP1 NODE_8, whole genome shotgun sequence (1054629 bp)
Overview 1 RT 1: 424333-430656 bp Neighborhood of RT #1 [424333, 430766] ABC_ABC_ChvD MarR Acetyltransf_1 RVT-Retrons nadD DacB Feature: gene Location: 424333-425988 bp Ori: OYU40879.1 Feature: domain Description: ABC_ABC_ChvD Location: 424348-425977 bp Feature: domain Description: ABC_ABC_ChvD Location: 42 4348-42 5977 bp Feature: gene Location: 426071-426946 bp Ori: OYU40880.1 Feature: domain Description: MarR Location: 426209-426443 bp Feature: domain Description: MarR Location: 42 62 09-42 6443 bp Feature: domain Description: Acetyltransf_1 Location: 426629-426884 bp Feature: domain Description: Acetyltransf_1 Location: 42 662 9-42 6884 bp Feature: gene Location: 427071-428396 bp Ori: OYU40881.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 427551-428163 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 42 7551-42 8163 bp Feature: gene Location: 428574-429170 bp Ori: OYU41443.1 Feature: domain Description: nadD Location: 428607-429159 bp Feature: domain Description: nadD Location: 42 8607-42 9159 bp Feature: gene Location: 429279-430766 bp Ori: OYU41444.1 Gene: dacB Feature: domain Description: DacB Location: 429441-430656 bp Feature: domain Description: DacB Location: 42 9441-430656 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ABC_ABC_ChvD (TIGR03719), MarR (pfam01047), Acetyltransf_1 (pfam00583), RVT-Retrons, nadD (PRK07152), DacB (COG2027)