myRT

myRT report for GCA_002256435.1_ASM225643v1

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Seq: NKJC01000001.1 Chitinophagaceae bacterium BSSC1 NODE_2, whole genome shotgun sequence (2020178 bp)
Overview 1 RT 1: 21846-26976 bp 2 RT 2: 1320367-1326947 bp Neighborhood of RT #1 [21846, 26978] pP_pnuc_1 RVT-Retrons CM_mono_grmpos FRG Neighborhood of RT #2 [1320367, 1327144] RVT-Retrons RVT-Retrons McrBC PRK11331 PRK11331 PRK11331 Feature: gene Location: 21846-22499 bp Feature: gene Location: 22825-24246 bp Feature: domain Description: pP_pnuc_1 Location: 23836-24217 bp Feature: domain Description: pP_pnuc_1 Location: 23836-2421 7 bp Feature: gene Location: 24349-25230 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 24457-24997 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 24457-24997 bp Feature: gene Location: 25368-26261 bp Feature: domain Description: CM_mono_grmpos Location: 25800-25926 bp Feature: domain Description: CM_mono_grmpos Location: 25800-25926 bp Feature: gene Location: 26889-26978 bp Feature: domain Description: FRG Location: 26901-26976 bp Feature: domain Description: FRG Location: 26901 -26976 bp Feature: gene Location: 1320367-1321062 bp Feature: gene Location: 1321072-1321857 bp Feature: gene Location: 1321854-1323341 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1322052-1322301 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 322052-1 322301 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1322622-1322970 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 322622-1 322970 bp Feature: gene Location: 1323646-1324896 bp Feature: domain Description: McrBC Location: 1323811-1324738 bp Feature: domain Description: McrBC Location: 1 32381 1 -1 324738 bp Feature: gene Location: 1324889-1327144 bp Feature: domain Description: PRK11331 Location: 1325366-1325951 bp Feature: domain Description: PRK1 1 331 Location: 1 325366-1 325951 bp Feature: domain Description: PRK11331 Location: 1326236-1326527 bp Feature: domain Description: PRK1 1 331 Location: 1 326236-1 326527 bp Feature: domain Description: PRK11331 Location: 1326824-1326947 bp Feature: domain Description: PRK1 1 331 Location: 1 326824-1 326947 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pP_pnuc_1 (pfam18165), RVT-Retrons, CM_mono_grmpos (TIGR01805), FRG (smart00901), McrBC (pfam10117), PRK11331 (5-methylcytosine-specific restriction enzyme subunit McrB; Provisional)