myRT

myRT report for GCA_002257695.1_ASM225769v1

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Seq: LSLL01000070.1 Sporomusa acidovorans DSM 3132 SPACI_contig000070, whole genome shotgun sequence (55274 bp)
Overview 1 RT 1: 40368-45785 bp Neighborhood of RT #1 [40368, 45785] M20_Acy1L2_AbgB Amidohydro_2 RVT-GII AcrR Feature: gene Location: 40368-41774 bp Feature: domain Description: M20_Acy1L2_AbgB Location: 40398-41700 bp Feature: domain Description: M20_Acy1 L2_AbgB Location: 40398-41 700 bp Feature: gene Location: 41951-42940 bp Feature: domain Description: Amidohydro_2 Location: 42011-42929 bp Feature: domain Description: Amidohydro_2 Location: 4201 1 -42929 bp Feature: gene Location: 43442-44383 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43670-44339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43670-44339 bp Feature: gene Location: 44828-45391 bp Feature: domain Description: AcrR Location: 44834-45146 bp Feature: domain Description: AcrR Location: 44834-451 46 bp Feature: gene Location: 45558-45785 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT M20_Acy1L2_AbgB (cd05673), Amidohydro_2 (pfam04909), RVT-GII, AcrR (COG1309)

Seq: LSLL01000087.1 Sporomusa acidovorans DSM 3132 SPACI_contig000087, whole genome shotgun sequence (4694 bp)
Overview 1 RT 1: 496-4168 bp Neighborhood of RT #1 [496, 4168] HNHc RVT-GII Feature: gene Location: 496-1314 bp Feature: domain Description: HNHc Note: nucleases Location: 874-1030 bp Feature: domain Description: HNHc Note: nucleases Location: 874-1030 bp Feature: gene Location: 1311-2057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1317-1998 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1317-1998 bp Feature: gene Location: 2162-2584 bp Feature: gene Location: 3821-4168 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: LSLL01000003.1 Sporomusa acidovorans DSM 3132 SPACI_contig000003, whole genome shotgun sequence (68283 bp)
Overview 1 RT 1: 65205-68199 bp Neighborhood of RT #1 [65205, 68279] AraC AraC_E_bind AAT RVT-GII GIIM Feature: gene Location: 65205-66083 bp Feature: domain Description: AraC Location: 65232-65523 bp Feature: domain Description: AraC Location: 6523 2-65523 bp Feature: domain Description: AraC_E_bind Location: 65607-66081 bp Feature: domain Description: AraC_E_bind Location: 65607-66081 bp Feature: gene Location: 66095-67225 bp Feature: domain Description: AAT Location: 66395-67094 bp Feature: domain Description: AAT Location: 663 95-67094 bp Feature: gene Location: 67512-68279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67515-67914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67515-67914 bp Feature: domain Description: GIIM Note: maturase Location: 67995-68199 bp Feature: domain Description: GIIM Note: maturase Location: 67995-68199 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AraC (COG2207), AraC_E_bind (smart00871), AAT (pfam03417), RVT-GII, GIIM (pfam08388)