myRT

myRT report for GCA_002257705.1_ASM225770v1

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Seq: LSLK01000098.1 Sporomusa silvacetica DSM 10669 SPSIL_contig000098, whole genome shotgun sequence (60057 bp)
Overview 1 RT 1: 34798-40435 bp Neighborhood of RT #1 [34798, 40785] DegQ Phage_int_SAM_1 INT_Cre_C RVT-GII Intron_maturas2 YoaR YrrD Feature: gene Location: 34798-35874 bp Ori: OZC15733.1 Gene: htrA_2 Feature: domain Description: DegQ Location: 34837-35842 bp Feature: domain Description: DegQ Location: 34837-35842 bp Feature: gene Location: 35995-36975 bp Ori: OZC15734.1 Gene: xerD_2 Feature: domain Description: Phage_int_SAM_1 Location: 36085-36271 bp Feature: domain Description: Phage_int_SAM_1 Location: 36085-36271 bp Feature: domain Description: INT_Cre_C Location: 36415-36970 bp Feature: domain Description: INT_Cre_C Location: 3641 5-36970 bp Feature: gene Location: 37208-37930 bp Ori: OZC15735.1 Gene: ltrA_5 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37211-37379 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3721 1 -37379 bp Feature: domain Description: Intron_maturas2 Location: 37463-37691 bp Feature: domain Description: Intron_maturas2 Location: 37463-37691 bp Feature: gene Location: 38304-39695 bp Ori: OZC15736.1 Gene: vanW_2 Feature: domain Description: YoaR Location: 38517-39540 bp Feature: domain Description: YoaR Location: 3851 7-39540 bp Feature: gene Location: 39940-40785 bp Ori: OZC15737.1 Feature: domain Description: YrrD Location: 39943-40435 bp Feature: domain Description: YrrD Location: 39943-40435 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DegQ (pfam08181), Phage_int_SAM_1 (pfam02899), INT_Cre_C (cd00799), RVT-GII, Intron_maturas2 (pfam01348), YoaR (COG2720), YrrD (COG3881)

Seq: LSLK01000126.1 Sporomusa silvacetica DSM 10669 SPSIL_contig000126, whole genome shotgun sequence (1895 bp)
Overview 1 RT 1: 499-1735 bp Neighborhood of RT #1 [499, 1800] RVT-GII GIIM Feature: gene Location: 499-1800 bp Ori: OZC14083.1 Gene: ltrA_7 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 754-1447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 754-1447 bp Feature: domain Description: GIIM Note: maturase Location: 1507-1735 bp Feature: domain Description: GIIM Note: maturase Location: 1507-1735 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: LSLK01000102.1 Sporomusa silvacetica DSM 10669 SPSIL_contig000102, whole genome shotgun sequence (68103 bp)
Overview 1 RT 1: 8-2130 bp Neighborhood of RT #1 [8, 2130] RVT-GII GIIM Feature: gene Location: 8-1006 bp Ori: OZC15296.1 Gene: ltrA_6 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14-641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14-641 bp Feature: domain Description: GIIM Note: maturase Location: 734-926 bp Feature: domain Description: GIIM Note: maturase Location: 73 4-926 bp Feature: gene Location: 1585-1788 bp Feature: gene Location: 1999-2130 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: LSLK01000057.1 Sporomusa silvacetica DSM 10669 SPSIL_contig000057, whole genome shotgun sequence (122210 bp)
Overview 1 RT 1: 120135-121320 bp Neighborhood of RT #1 [120135, 121340] RVT-GII GIIM Feature: gene Location: 120135-120269 bp Feature: gene Location: 120388-120597 bp Feature: gene Location: 120798-121340 bp Ori: OZC21184.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 120801-121041 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 120801-12104 1 bp Feature: domain Description: GIIM Note: maturase Location: 121125-121320 bp Feature: domain Description: GIIM Note: maturase Location: 121125-121320 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: LSLK01000074.1 Sporomusa silvacetica DSM 10669 SPSIL_contig000074, whole genome shotgun sequence (251492 bp)
Overview 1 RT 1: 248141-251426 bp Neighborhood of RT #1 [248141, 251491] ARO8 RVT-GII Feature: gene Location: 248141-249652 bp Ori: OZC17972.1 Gene: lysN_2 Feature: domain Description: ARO8 Location: 248195-249602 bp Feature: domain Description: ARO8 Location: 248195 -249602 bp Feature: gene Location: 249991-250176 bp Feature: gene Location: 251090-251491 bp Ori: OZC17974.1 Gene: ltrA_4 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 251270-251426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25 1270-25 1426 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ARO8 (COG1167), RVT-GII

Seq: LSLK01000065.1 Sporomusa silvacetica DSM 10669 SPSIL_contig000065, whole genome shotgun sequence (180407 bp)
Overview 1 RT 1: 168249-177302 bp Neighborhood of RT #1 [168249, 177302] MopB_Phenylacetyl-CoA-OR MopB_Phenylacetyl-CoA-OR PRK15488 TorD RVT_N RVT-GII GIIM SLC5sbd Feature: gene Location: 168249-171005 bp Ori: OZC19678.1 Gene: psrA Feature: domain Description: MopB_Phenylacetyl-CoA-OR Location: 168423-169641 bp Feature: domain Description: MopB_Phenylacetyl-CoA-OR Location: 16 8423-16 96 41 bp Feature: domain Description: MopB_Phenylacetyl-CoA-OR Location: 169785-170412 bp Feature: domain Description: MopB_Phenylacetyl-CoA-OR Location: 16 9785-170412 bp Feature: domain Description: PRK15488 Location: 170706-170868 bp Feature: domain Description: PRK15488 Location: 170706 -17086 8 bp Feature: gene Location: 171119-171754 bp Ori: OZC19679.1 Gene: torD_1 Feature: domain Description: TorD Location: 171140-171743 bp Feature: domain Description: TorD Location: 171140-171743 bp Feature: gene Location: 171987-173633 bp Ori: OZC19680.1 Gene: ltrA_3 Feature: domain Description: RVT_N Location: 172020-172263 bp Feature: domain Description: RVT_N Location: 172020-17226 3 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 172308-172983 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 172308-172983 bp Feature: domain Description: GIIM Note: maturase Location: 173082-173316 bp Feature: domain Description: GIIM Note: maturase Location: 173082-173316 bp Feature: gene Location: 174869-176254 bp Ori: OZC19681.1 Feature: domain Description: SLC5sbd Location: 174896-176219 bp Feature: domain Description: SLC5sbd Location: 174896 -176 219 bp Feature: gene Location: 176379-177302 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MopB_Phenylacetyl-CoA-OR (cd02760), PRK15488 (thiosulfate reductase PhsA; Provisional), TorD (COG3381), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), SLC5sbd (cd10322)

Seq: LSLK01000155.1 Sporomusa silvacetica DSM 10669 SPSIL_contig000155, whole genome shotgun sequence (774 bp)
Overview 1 RT 1: 85-472 bp Neighborhood of RT #1 [85, 636] RVT-GII GIIM Feature: gene Location: 85-636 bp Ori: OZC13389.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91-190 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91-190 bp Feature: domain Description: GIIM Note: maturase Location: 241-472 bp Feature: domain Description: GIIM Note: maturase Location: 241-47 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: LSLK01000002.1 Sporomusa silvacetica DSM 10669 SPSIL_contig000002, whole genome shotgun sequence (1159 bp)
Overview 1 RT 1: 95-821 bp Neighborhood of RT #1 [95, 823] RVT-GII RVT-GII Feature: gene Location: 95-466 bp Ori: OZC24081.1 Gene: ltrA_1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101-416 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101-416 bp Feature: gene Location: 467-823 bp Ori: OZC24082.1 Gene: ltrA_2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 761-821 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 761-8 21 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: LSLK01000070.1 Sporomusa silvacetica DSM 10669 SPSIL_contig000070, whole genome shotgun sequence (321264 bp)
Overview 1 RT 1: 297291-300549 bp Neighborhood of RT #1 [297291, 300554] HTH_BmrR BltR2 RVT-GII DUF3231 DUF3231 Feature: gene Location: 297291-298109 bp Ori: OZC18904.1 Gene: bmrR_2 Feature: domain Description: HTH_BmrR Location: 297306-297624 bp Feature: domain Description: HTH_BmrR Location: 29 7306-29 7624 bp Feature: domain Description: BltR2 Location: 297669-298095 bp Feature: domain Description: BltR2 Location: 29 7669 -29 809 5 bp Feature: gene Location: 298147-298239 bp Feature: gene Location: 298263-298721 bp Ori: OZC18906.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 298401-298539 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29 8401-29 8539 bp Feature: gene Location: 299179-299562 bp Feature: gene Location: 300048-300554 bp Ori: OZC18908.1 Feature: domain Description: DUF3231 Location: 300108-300339 bp Feature: domain Description: DUF3231 Location: 300108-300339 bp Feature: domain Description: DUF3231 Location: 300342-300549 bp Feature: domain Description: DUF3231 Location: 300342-300549 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_BmrR (cd01107), BltR2 (COG4978), RVT-GII, DUF3231 (pfam11553)

Seq: LSLK01000152.1 Sporomusa silvacetica DSM 10669 SPSIL_contig000152, whole genome shotgun sequence (194182 bp)
Overview 1 RT 1: 336-9185 bp Neighborhood of RT #1 [336, 9185] Zn-ribbon_8 RVT-GII GIIM DUF772 DDE_Tnp_1_3 DDE_Tnp_1_6 RVT-GII spore_ybaN_pdaB LysM GIIM RVT-GII Feature: gene Location: 336-695 bp Ori: OZC13391.1 Feature: domain Description: Zn-ribbon_8 Location: 450-543 bp Feature: domain Description: Zn-ribbon_8 Location: 450-543 bp Feature: gene Location: 1089-1859 bp Ori: OZC13392.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1179-1473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1179-1473 bp Feature: domain Description: GIIM Note: maturase Location: 1554-1770 bp Feature: domain Description: GIIM Note: maturase Location: 1554-1770 bp Feature: gene Location: 1878-3392 bp Ori: OZC13393.1 Feature: domain Description: DUF772 Location: 2037-2256 bp Feature: domain Description: DUF772 Location: 2037-2256 bp Feature: domain Description: DDE_Tnp_1_3 Location: 2658-2904 bp Feature: domain Description: DDE_Tnp_1_3 Location: 2658-2904 bp Feature: domain Description: DDE_Tnp_1_6 Location: 2991-3342 bp Feature: domain Description: DDE_Tnp_1_6 Location: 2991-3342 bp Feature: gene Location: 3461-4075 bp Ori: OZC13394.1 Gene: ltrA_8 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3665-4043 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3665-4043 bp Feature: gene Location: 4020-4193 bp Feature: gene Location: 4619-4786 bp Feature: gene Location: 5740-6558 bp Ori: OZC13398.1 Gene: pgdA_4 Feature: domain Description: spore_ybaN_pdaB Location: 5815-6382 bp Feature: domain Description: spore_ybaN_pdaB Location: 5815-6382 bp Feature: domain Description: LysM Location: 6412-6544 bp Feature: domain Description: LysM Location: 6412-6544 bp Feature: gene Location: 7227-7529 bp Ori: OZC13399.1 Feature: domain Description: GIIM Note: maturase Location: 7230-7443 bp Feature: domain Description: GIIM Note: maturase Location: 7230-7443 bp Feature: gene Location: 7568-7936 bp Ori: OZC13400.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7658-7895 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7658-7895 bp Feature: gene Location: 7902-8156 bp Feature: gene Location: 8568-9185 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Zn-ribbon_8 (pfam09723), RVT-GII, GIIM (pfam08388), DUF772 (pfam05598), DDE_Tnp_1_3 (pfam13612), DDE_Tnp_1_6 (pfam13751), spore_ybaN_pdaB (TIGR02764), LysM (smart00257)