myRT

myRT report for GCA_002257795.1_ASM225779v1

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Seq: NBXZ01000017.1 Klebsiella pneumoniae strain WCHKP1716 NODE_17_length_120249_cov_106.744, whole genome shotgun sequence (120249 bp)
Overview 1 RT 1: 74168-82860 bp Neighborhood of RT #1 [74168, 82889] Beta_protein IncA RVT-UG5 PRK04247 RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like Feature: gene Location: 74168-75196 bp Feature: domain Description: Beta_protein Location: 74186-75176 bp Feature: domain Description: Beta_protein Location: 741 86-751 76 bp Feature: gene Location: 75741-76415 bp Feature: domain Description: IncA Location: 76032-76374 bp Feature: domain Description: IncA Location: 76032-76374 bp Feature: gene Location: 76863-79880 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 77361-77856 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 77361 -77856 bp Feature: gene Location: 80060-81160 bp Feature: domain Description: PRK04247 Location: 80123-80354 bp Feature: domain Description: PRK04247 Location: 801 23-80354 bp Feature: gene Location: 81171-82889 bp Feature: domain Description: RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like Location: 81498-82032 bp Feature: domain Description: RMtype1 _S_Ppo21 ORF8840P_TRD1 -CR1 _like Location: 81 498-82032 bp Feature: domain Description: RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like Location: 82482-82860 bp Feature: domain Description: RMtype1 _S_Ppo21 ORF8840P_TRD1 -CR1 _like Location: 82482-82860 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Beta_protein (pfam14350), IncA, RVT-UG5, PRK04247 (endonuclease NucS), RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like (cd17293)

Seq: NBXZ01000022.1 Klebsiella pneumoniae strain WCHKP1716 NODE_22_length_82981_cov_104.312, whole genome shotgun sequence (82981 bp)
Overview 1 RT 1: 62312-65606 bp Neighborhood of RT #1 [62312, 65620] RVT-GII PRK10276 Feature: gene Location: 62312-62527 bp Feature: gene Location: 62794-63024 bp Feature: gene Location: 63258-64793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63663-64401 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63663-64401 bp Feature: gene Location: 64844-65077 bp Feature: gene Location: 65195-65620 bp Feature: domain Description: PRK10276 Location: 65198-65606 bp Feature: domain Description: PRK102 76 Location: 65198-65606 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: NBXZ01000004.1 Klebsiella pneumoniae strain WCHKP1716 NODE_4_length_388716_cov_89.7636, whole genome shotgun sequence (388716 bp)
Overview 1 RT 1: 179936-184065 bp Neighborhood of RT #1 [179936, 184070] PRK09951 PRK09951 RVT-UG11 umuC PRK10276 Feature: gene Location: 179936-180142 bp Feature: domain Description: PRK09951 Location: 179939-180089 bp Feature: domain Description: PRK09951 Location: 17993 9-180089 bp Feature: gene Location: 180189-180602 bp Feature: domain Description: PRK09951 Location: 180192-180600 bp Feature: domain Description: PRK09951 Location: 180192-180600 bp Feature: gene Location: 180803-181711 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 181076-181532 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 181076-18153 2 bp Feature: gene Location: 182384-183649 bp Feature: domain Description: umuC Location: 182387-183647 bp Feature: domain Description: umuC Location: 1823 87-183 647 bp Feature: gene Location: 183651-184070 bp Feature: domain Description: PRK10276 Location: 183654-184065 bp Feature: domain Description: PRK10276 Location: 183 654-184065 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09951 (hypothetical protein; Provisional), RVT-UG11, umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)