myRT

myRT report for GCA_002258235.1_ASM225823v1

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Seq: NOYB01000024.1 Rhodococcus sp. 06-470-2 RS1H3_8, whole genome shotgun sequence (252105 bp)
Overview 1 RT 1: 143396-151151 bp Neighborhood of RT #1 [143396, 151177] Dcm Dcm IstB_IS21 RVT-UNC carb_red_PTCR-like_SDR_c carb_red_PTCR-like_SDR_c LysR Feature: gene Location: 143396-144544 bp Ori: OZC63300.1 Feature: domain Description: Dcm Location: 143405-143918 bp Feature: domain Description: Dcm Location: 1 43405-1 4391 8 bp Feature: domain Description: Dcm Location: 144110-144251 bp Feature: domain Description: Dcm Location: 1 441 1 0-1 44251 bp Feature: gene Location: 145221-145750 bp Feature: domain Description: IstB_IS21 Location: 145260-145419 bp Feature: domain Description: IstB_IS21 Location: 1 45260-1 4541 9 bp Feature: gene Location: 145955-148462 bp Ori: OZC63301.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 146087-146498 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1 46087-1 46498 bp Feature: gene Location: 149561-150262 bp Ori: OZC63302.1 Feature: domain Description: carb_red_PTCR-like_SDR_c Location: 149582-150008 bp Feature: domain Description: carb_red_PTCR-like_SDR_c Location: 1 49582-1 50008 bp Feature: domain Description: carb_red_PTCR-like_SDR_c Location: 150020-150260 bp Feature: domain Description: carb_red_PTCR-like_SDR_c Location: 1 50020-1 50260 bp Feature: gene Location: 150344-151177 bp Ori: OZC63416.1 Feature: domain Description: LysR Location: 150362-151151 bp Feature: domain Description: LysR Location: 1 50362-1 51 1 51 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Dcm (COG0270), IstB_IS21 (pfam01695), RVT-UG11/RVT-UG5(RVT-UNC), carb_red_PTCR-like_SDR_c (cd05324), LysR (COG0583)

Seq: NOYB01000016.1 Rhodococcus sp. 06-470-2 RS1H3_3, whole genome shotgun sequence (469039 bp)
Overview 1 RT 1: 19492-25325 bp Neighborhood of RT #1 [19492, 25325] UgpE GalA RVT-Retrons DUF3558 Feature: gene Location: 19492-20421 bp Ori: OZC65392.1 Feature: domain Description: UgpE Location: 19573-20419 bp Feature: domain Description: UgpE Location: 19573-2 0419 bp Feature: gene Location: 20418-22550 bp Ori: OZC65393.1 Feature: domain Description: GalA Location: 20814-22392 bp Feature: domain Description: GalA Location: 2 0814-2 2 392 bp Feature: gene Location: 22632-23888 bp Ori: OZC65394.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 23052-23658 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 3052 -2 3658 bp Feature: gene Location: 24397-24912 bp Ori: OZC65754.1 Feature: domain Description: DUF3558 Location: 24403-24886 bp Feature: domain Description: DUF3558 Location: 2 4403-2 4886 bp Feature: gene Location: 24939-25325 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UgpE (COG0395), GalA (COG3345), RVT-Retrons, DUF3558 (pfam12079)