myRT

myRT report for GCA_002258635.1_ASM225863v1

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Seq: NOZL01000039.1 Rhodococcus sp. 05-2221-1B RS1G1_9, whole genome shotgun sequence (202593 bp)
Overview 1 RT 1: 100915-108403 bp Neighborhood of RT #1 [100915, 108696] LysR carb_red_PTCR-like_SDR_c carb_red_PTCR-like_SDR_c RVT-UNC IstB_IS21 Dcm Dcm Feature: gene Location: 100915-101748 bp Ori: OZE61391.1 Feature: domain Description: LysR Location: 100933-101722 bp Feature: domain Description: LysR Location: 1 00933-1 01 722 bp Feature: gene Location: 101830-102531 bp Ori: OZE61318.1 Feature: domain Description: carb_red_PTCR-like_SDR_c Location: 101851-102277 bp Feature: domain Description: carb_red_PTCR-like_SDR_c Location: 1 01 851 -1 02277 bp Feature: domain Description: carb_red_PTCR-like_SDR_c Location: 102289-102529 bp Feature: domain Description: carb_red_PTCR-like_SDR_c Location: 1 02289-1 02529 bp Feature: gene Location: 103630-106137 bp Ori: OZE61319.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 103762-104173 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1 03762-1 041 73 bp Feature: gene Location: 106342-106871 bp Feature: domain Description: IstB_IS21 Location: 106381-106540 bp Feature: domain Description: IstB_IS21 Location: 1 06381 -1 06540 bp Feature: gene Location: 107548-108696 bp Ori: OZE61320.1 Feature: domain Description: Dcm Location: 107557-108070 bp Feature: domain Description: Dcm Location: 1 07557-1 08070 bp Feature: domain Description: Dcm Location: 108262-108403 bp Feature: domain Description: Dcm Location: 1 08262-1 08403 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LysR (COG0583), carb_red_PTCR-like_SDR_c (cd05324), RVT-UG11/RVT-UG5(RVT-UNC), IstB_IS21 (pfam01695), Dcm (COG0270)

Seq: NOZL01000012.1 Rhodococcus sp. 05-2221-1B RS1G1_2, whole genome shotgun sequence (469033 bp)
Overview 1 RT 1: 19492-25325 bp Neighborhood of RT #1 [19492, 25325] UgpE GalA RVT-Retrons DUF3558 Feature: gene Location: 19492-20421 bp Ori: OZE70651.1 Feature: domain Description: UgpE Location: 19573-20419 bp Feature: domain Description: UgpE Location: 19573-2 0419 bp Feature: gene Location: 20418-22550 bp Ori: OZE70652.1 Feature: domain Description: GalA Location: 20814-22392 bp Feature: domain Description: GalA Location: 2 0814-2 2 392 bp Feature: gene Location: 22632-23888 bp Ori: OZE70653.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 23052-23658 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 3052 -2 3658 bp Feature: gene Location: 24397-24912 bp Ori: OZE71013.1 Feature: domain Description: DUF3558 Location: 24403-24886 bp Feature: domain Description: DUF3558 Location: 2 4403-2 4886 bp Feature: gene Location: 24939-25325 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UgpE (COG0395), GalA (COG3345), RVT-Retrons, DUF3558 (pfam12079)