myRT

myRT report for GCA_002259405.1_ASM225940v1

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Seq: NPFW01000009.1 Rhodococcus sp. 14-2483-1-2 RS1A8_10, whole genome shotgun sequence (251399 bp)
Overview 1 RT 1: 179416-185258 bp Neighborhood of RT #1 [179416, 185260] DUF3558 RVT-Retrons GalA UgpE Feature: gene Location: 179416-179802 bp Feature: gene Location: 179832-180371 bp Ori: OZF35113.1 Feature: domain Description: DUF3558 Location: 179856-180339 bp Feature: domain Description: DUF3558 Location: 1 79856-1 80339 bp Feature: gene Location: 180879-182123 bp Ori: OZF35114.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 181287-181893 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 81 287-1 81 893 bp Feature: gene Location: 182202-184301 bp Ori: OZF35212.1 Feature: domain Description: GalA Location: 182571-184146 bp Feature: domain Description: GalA Location: 1 82571 -1 841 46 bp Feature: gene Location: 184331-185260 bp Ori: OZF35115.1 Feature: domain Description: UgpE Location: 184412-185258 bp Feature: domain Description: UgpE Location: 1 8441 2-1 85258 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3558 (pfam12079), RVT-Retrons, GalA (COG3345), UgpE (COG0395)

Seq: NPFW01000007.1 Rhodococcus sp. 14-2483-1-2 RS1A8_2, whole genome shotgun sequence (690367 bp)
Overview 1 RT 1: 355199-359474 bp Neighborhood of RT #1 [355199, 359474] Cas2_I_II_III Cas_Cas1 RVT-CRISPR CRISPR_Cas6 Feature: gene Location: 355199-355483 bp Ori: OZF37603.1 Gene: cas2 Feature: domain Description: Cas2_I_II_III Location: 355214-355445 bp Feature: domain Description: Cas2 _I_II_III Location: 3552 14-355445 bp Feature: gene Location: 355518-356573 bp Ori: OZF37297.1 Gene: cas1 Feature: domain Description: Cas_Cas1 Location: 355623-356478 bp Feature: domain Description: Cas_Cas1 Location: 35562 3-356478 bp Feature: gene Location: 356592-357290 bp Ori: OZF37298.1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 356736-357288 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 356736-3572 88 bp Feature: gene Location: 357355-358119 bp Ori: OZF37299.1 Feature: domain Description: CRISPR_Cas6 Location: 357739-358075 bp Feature: domain Description: CRISPR_Cas6 Location: 357739-358075 bp Feature: gene Location: 358077-359474 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), Cas_Cas1 (pfam01867), RVT-CRISPR, CRISPR_Cas6 (pfam10040)