myRT

myRT report for GCA_002261025.1_ASM226102v1

Download annotations/find similar RTs

Seq: NNAV01000037.1 Salmonella enterica subsp. enterica serovar Typhimurium strain STy014 SEQBC44__contig_37_49_15, whole genome shotgun sequence (92305 bp)
Overview 1 RT 1: 63845-70173 bp Neighborhood of RT #1 [63845, 70175] 5 RVT-UG11 PRK10201 PRK05658 Feature: gene Location: 63845-65548 bp Ori: OZH81587.1 Feature: domain Description: 5 Location: 65072-65366 bp Feature: domain Description: 5 Location: 65072-65366 bp Feature: gene Location: 66320-66505 bp Feature: gene Location: 66613-67239 bp Ori: OZH81589.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 66616-67051 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 6661 6-67051 bp Feature: gene Location: 67563-68069 bp Ori: OZH81590.1 Feature: domain Description: PRK10201 Location: 67566-68064 bp Feature: domain Description: PRK1 0201 Location: 67566-68064 bp Feature: gene Location: 68193-70175 bp Ori: OZH81591.1 Feature: domain Description: PRK05658 Location: 68331-70173 bp Feature: domain Description: PRK05658 Location: 68331 -701 73 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 5 (PHA02596), RVT-UG11, PRK10201 (G/U mismatch-specific DNA glycosylase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)

Seq: NNAV01000012.1 Salmonella enterica subsp. enterica serovar Typhimurium strain STy014 SEQBC44__contig_12_53_76, whole genome shotgun sequence (48210 bp)
Overview 1 RT 1: 44801-48210 bp Neighborhood of RT #1 [44801, 48210] PRK10473 RVT-Retrons Feature: gene Location: 44801-45988 bp Ori: OZH83843.1 Feature: domain Description: PRK10473 Location: 44804-45980 bp Feature: domain Description: PRK10473 Location: 44804-45980 bp Feature: gene Location: 46333-46542 bp Feature: gene Location: 46790-47659 bp Ori: OZH83849.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 46835-47420 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 46835-4742 0 bp Feature: gene Location: 47725-48210 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10473 (MdtL family multidrug efflux MFS transporter), RVT-Retrons