myRT

myRT report for GCA_002261475.1_ASM226147v1

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Seq: NEVN01000013.1 Bordetella genomosp. 5 strain AU14646 NODE_2_length_533378_cov_27.065_ID_3, whole genome shotgun sequence (533378 bp)
Overview 1 RT 1: 33501-45995 bp Neighborhood of RT #1 [33501, 46057] N6_Mtase met_A_Alw26 RVT-UG1 COG3440 INT_RitA_C_like Feature: gene Location: 33501-37985 bp Feature: domain Description: N6_Mtase Location: 34944-35301 bp Feature: domain Description: N6_Mtase Location: 34944-35301 bp Feature: domain Description: met_A_Alw26 Location: 37386-37620 bp Feature: domain Description: met_A_Alw26 Location: 37386-37620 bp Feature: gene Location: 38489-40480 bp Feature: gene Location: 40540-44514 bp Ori: OZI33368.1 Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 41275-41782 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 41 275-41 782 bp Feature: gene Location: 44898-45626 bp Ori: OZI33369.1 Feature: domain Description: COG3440 Location: 45228-45504 bp Feature: domain Description: COG3440 Location: 45228-45504 bp Feature: gene Location: 45674-46057 bp Ori: OZI33782.1 Feature: domain Description: INT_RitA_C_like Location: 45701-45995 bp Feature: domain Description: INT_RitA_C_like Location: 45701 -45995 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), met_A_Alw26 (TIGR02987), RVT-UG1, COG3440 (Predicted restriction endonuclease ), INT_RitA_C_like (cd01188)

Seq: NEVN01000010.1 Bordetella genomosp. 5 strain AU14646 NODE_11_length_225265_cov_26.5969_ID_21, whole genome shotgun sequence (225702 bp)
Overview 1 RT 1: 4739-10709 bp Neighborhood of RT #1 [4739, 10771] MngR PBP2_Bug27 RVT-Retrons PBP2_Bug27 SDR_c Feature: gene Location: 4739-5593 bp Ori: OZI39580.1 Feature: domain Description: MngR Location: 4751-5456 bp Feature: domain Description: MngR Location: 4751-5456 bp Feature: gene Location: 5627-6574 bp Ori: OZI39751.1 Feature: domain Description: PBP2_Bug27 Location: 5693-6551 bp Feature: domain Description: PBP2 _Bug2 7 Location: 5693-6551 bp Feature: gene Location: 7003-8724 bp Ori: OZI39581.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7141-7765 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7141-7765 bp Feature: gene Location: 8812-9789 bp Ori: OZI39582.1 Feature: domain Description: PBP2_Bug27 Location: 8899-9769 bp Feature: domain Description: PBP2 _Bug2 7 Location: 8899-9769 bp Feature: gene Location: 10007-10771 bp Ori: OZI39583.1 Feature: domain Description: SDR_c Location: 10037-10709 bp Feature: domain Description: SDR_c Location: 10037-10709 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MngR (COG2188), PBP2_Bug27 (cd13578), RVT-Retrons, SDR_c (cd05233)