myRT

myRT report for GCA_002261495.1_ASM226149v1

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Seq: NKQU01000049.1 Pseudomonas avellanae strain MAFF 212061 Psa5-MAFF212061_Contig_0000049, whole genome shotgun sequence (1914 bp)
Overview 1 RT 1: 6-1914 bp Neighborhood of RT #1 [6, 1914] RVT-GII GIIM Feature: gene Location: 6-335 bp Feature: gene Location: 383-1750 bp Ori: OZI87496.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 716-1331 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71 6-1 331 bp Feature: domain Description: GIIM Note: maturase Location: 1388-1616 bp Feature: domain Description: GIIM Note: maturase Location: 1 388-1 61 6 bp Feature: gene Location: 1838-1914 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NKQU01000003.1 Pseudomonas avellanae strain MAFF 212061 Psa5-MAFF212061_Contig_0000003, whole genome shotgun sequence (1894 bp)
Overview 1 RT 1: 526-1636 bp Neighborhood of RT #1 [526, 1809] RVT-GII GIIM Feature: gene Location: 526-1809 bp Ori: OZI88019.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 766-1381 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 766-1381 bp Feature: domain Description: GIIM Note: maturase Location: 1426-1636 bp Feature: domain Description: GIIM Note: maturase Location: 142 6-1636 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NKQU01000562.1 Pseudomonas avellanae strain MAFF 212061 Psa5-MAFF212061_Contig_0000562, whole genome shotgun sequence (56470 bp)
Overview 1 RT 1: 1-4639 bp Neighborhood of RT #1 [1, 4692] RVT-G2L4 LysR ALDH_F6_MMSDH Feature: gene Location: 1-115 bp Feature: gene Location: 158-1144 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 377-962 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 3 77-962 bp Feature: gene Location: 2064-3008 bp Ori: OZI86072.1 Feature: domain Description: LysR Location: 2100-2952 bp Feature: domain Description: LysR Location: 2100-2952 bp Feature: gene Location: 3166-4692 bp Ori: OZI86073.1 Gene: mmsA Feature: domain Description: ALDH_F6_MMSDH Location: 3211-4639 bp Feature: domain Description: ALDH_F6_MMSDH Location: 3 211-463 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-G2L4, LysR (COG0583), ALDH_F6_MMSDH (cd07085)

Seq: NKQU01000267.1 Pseudomonas avellanae strain MAFF 212061 Psa5-MAFF212061_Contig_0000267, whole genome shotgun sequence (1044 bp)
Overview 1 RT 1: 1-514 bp Neighborhood of RT #1 [1, 960] RVT-UG7 Feature: gene Location: 1-960 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 112-514 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 112-514 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7