myRT

myRT report for GCA_002261545.1_ASM226154v1

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Seq: NLFI01000064.1 Klebsiella pneumoniae strain L96 L96_ctg064, whole genome shotgun sequence (13921 bp)
Overview 1 RT 1: 2886-6489 bp Neighborhood of RT #1 [2886, 6614] RVT_N RVT-GII GIIM HNHc DUF1380 Feature: gene Location: 2886-3143 bp Feature: gene Location: 3111-3286 bp Feature: gene Location: 4023-5690 bp Feature: RT Description: RVT_N Location: 4071-4308 bp Feature: RT Description: RVT_N Location: 4071 -4308 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4359-5001 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4359-5001 bp Feature: domain Description: GIIM Note: maturase Location: 5052-5286 bp Feature: domain Description: GIIM Note: maturase Location: 5052-5286 bp Feature: domain Description: HNHc Note: nucleases Location: 5496-5655 bp Feature: domain Description: HNHc Note: nucleases Location: 5496-5655 bp Feature: gene Location: 6004-6195 bp Feature: gene Location: 6192-6614 bp Feature: domain Description: DUF1380 Location: 6195-6489 bp Feature: domain Description: DUF1 380 Location: 61 95-6489 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF1380 (pfam07128)

Seq: NLFI01000068.1 Klebsiella pneumoniae strain L96 L96_ctg068, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 1-1442 bp Neighborhood of RT #1 [1, 1834] RVT-GII Feature: gene Location: 1-217 bp Feature: gene Location: 350-1834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752 -1442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NLFI01000025.1 Klebsiella pneumoniae strain L96 L96_ctg025, whole genome shotgun sequence (125988 bp)
Overview 1 RT 1: 102223-107955 bp Neighborhood of RT #1 [102223, 108485] AAA_15 RVT-Retrons STKc_PknB_like Feature: gene Location: 102223-102453 bp Feature: gene Location: 103332-105608 bp Feature: domain Description: AAA_15 Location: 103365-104373 bp Feature: domain Description: AAA_15 Location: 103 3 65-1043 73 bp Feature: gene Location: 105723-106823 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 105906-106434 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 105906-10643 4 bp Feature: gene Location: 107070-107312 bp Feature: gene Location: 107382-108485 bp Feature: domain Description: STKc_PknB_like Location: 107514-107955 bp Feature: domain Description: STKc_PknB_like Location: 107514-107955 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, STKc_PknB_like (cd14014)