myRT

myRT report for GCA_002261615.1_ASM226161v1

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Seq: NLFE01000035.1 Klebsiella pneumoniae strain L81 L81_ctg035, whole genome shotgun sequence (29362 bp)
Overview 1 RT 1: 25608-29362 bp Neighborhood of RT #1 [25608, 29362] PRK10724 SmpB RVT-UG11 PRK09678 Feature: gene Location: 25608-26084 bp Ori: OZJ24316.1 Feature: domain Description: PRK10724 Location: 25614-26079 bp Feature: domain Description: PRK1 0724 Location: 2561 4-26079 bp Feature: gene Location: 26195-26677 bp Ori: OZJ24317.1 Feature: domain Description: SmpB Location: 26225-26669 bp Feature: domain Description: SmpB Location: 26225-26669 bp Feature: gene Location: 27293-28066 bp Ori: OZJ24318.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 27428-27881 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 27428-27881 bp Feature: gene Location: 28470-28688 bp Ori: OZJ24319.1 Feature: domain Description: PRK09678 Location: 28473-28671 bp Feature: domain Description: PRK09678 Location: 28473-28671 bp Feature: gene Location: 28779-29362 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10724 (type II toxin-antitoxin system RatA family toxin), SmpB (pfam01668), RVT-UG11, PRK09678 (DNA-binding transcriptional regulator; Provisional)

Seq: NLFE01000017.1 Klebsiella pneumoniae strain L81 L81_ctg017, whole genome shotgun sequence (17299 bp)
Overview 1 RT 1: 9455-13090 bp Neighborhood of RT #1 [9455, 13090] Zn_Tnp_IS1 HTH_Tnp_IS1 PHA02517 RVT-GII GIIM Feature: gene Location: 9455-10152 bp Feature: domain Description: Zn_Tnp_IS1 Location: 9461-9563 bp Feature: domain Description: Zn_Tnp_IS1 Location: 9461-9563 bp Feature: domain Description: HTH_Tnp_IS1 Location: 9584-9719 bp Feature: domain Description: HTH_Tnp_IS1 Location: 9584-9719 bp Feature: gene Location: 10576-10755 bp Feature: domain Description: PHA02517 Location: 10579-10756 bp Feature: domain Description: PHA02 517 Location: 10579-10756 bp Feature: gene Location: 10836-12359 bp Ori: OZJ25436.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11109-11841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11109-11841 bp Feature: domain Description: GIIM Note: maturase Location: 11916-12114 bp Feature: domain Description: GIIM Note: maturase Location: 11916-12 114 bp Feature: gene Location: 12430-12738 bp Feature: gene Location: 12653-13090 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Zn_Tnp_IS1 (pfam03811), HTH_Tnp_IS1 (pfam12759), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)