myRT

myRT report for GCA_002261655.1_ASM226165v1

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Seq: NLFB01000112.1 Klebsiella pneumoniae strain L70 L70_ctg112, whole genome shotgun sequence (29362 bp)
Overview 1 RT 1: 1-3750 bp Neighborhood of RT #1 [1, 3755] PRK09678 RVT-UG11 SmpB PRK10724 Feature: gene Location: 1-584 bp Feature: gene Location: 675-893 bp Ori: OZJ39017.1 Feature: domain Description: PRK09678 Location: 678-876 bp Feature: domain Description: PRK09678 Location: 678-876 bp Feature: gene Location: 1297-2070 bp Ori: OZJ39018.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 1432-1885 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 1 432-1 885 bp Feature: gene Location: 2686-3168 bp Ori: OZJ39019.1 Feature: domain Description: SmpB Location: 2716-3160 bp Feature: domain Description: SmpB Location: 271 6-31 60 bp Feature: gene Location: 3279-3755 bp Ori: OZJ39020.1 Feature: domain Description: PRK10724 Location: 3285-3750 bp Feature: domain Description: PRK1 0724 Location: 3285-3750 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG11, SmpB (pfam01668), PRK10724 (type II toxin-antitoxin system RatA family toxin)

Seq: NLFB01000009.1 Klebsiella pneumoniae strain L70 L70_ctg009, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 1-1442 bp Neighborhood of RT #1 [1, 1834] RVT-GII Feature: gene Location: 1-217 bp Feature: gene Location: 350-1834 bp Ori: OZJ43022.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752 -1442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NLFB01000005.1 Klebsiella pneumoniae strain L70 L70_ctg005, whole genome shotgun sequence (20618 bp)
Overview 1 RT 1: 4210-7412 bp Neighborhood of RT #1 [4210, 7845] RVT-GII GIIM PHA02517 Zn_Tnp_IS1 HTH_Tnp_IS1 Feature: gene Location: 4210-4647 bp Feature: gene Location: 4562-4870 bp Feature: gene Location: 4941-6464 bp Ori: OZJ43447.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5214-5946 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5214-5946 bp Feature: domain Description: GIIM Note: maturase Location: 6021-6219 bp Feature: domain Description: GIIM Note: maturase Location: 6021-6219 bp Feature: gene Location: 6545-6724 bp Feature: domain Description: PHA02517 Location: 6548-6725 bp Feature: domain Description: PHA02517 Location: 6548-6725 bp Feature: gene Location: 7148-7845 bp Feature: domain Description: Zn_Tnp_IS1 Location: 7154-7256 bp Feature: domain Description: Zn_Tnp_IS1 Location: 7154-7256 bp Feature: domain Description: HTH_Tnp_IS1 Location: 7277-7412 bp Feature: domain Description: HTH_Tnp_IS1 Location: 7277-7412 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), Zn_Tnp_IS1 (pfam03811), HTH_Tnp_IS1 (pfam12759)