myRT

myRT report for GCA_002261665.1_ASM226166v1

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Seq: NLFC01000141.1 Klebsiella pneumoniae strain L79 L79_ctg141, whole genome shotgun sequence (266948 bp)
Overview 1 RT 1: 243184-248916 bp Neighborhood of RT #1 [243184, 249446] AAA_15 RVT-Retrons STKc_PknB_like Feature: gene Location: 243184-243414 bp Feature: gene Location: 244293-246569 bp Feature: domain Description: AAA_15 Location: 244326-245334 bp Feature: domain Description: AAA_1 5 Location: 244326-245334 bp Feature: gene Location: 246684-247784 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 246867-247395 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 246867-247395 bp Feature: gene Location: 248031-248273 bp Feature: gene Location: 248343-249446 bp Feature: domain Description: STKc_PknB_like Location: 248475-248916 bp Feature: domain Description: STKc_PknB_like Location: 248475-24891 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, STKc_PknB_like (cd14014)

Seq: NLFC01000042.1 Klebsiella pneumoniae strain L79 L79_ctg042, whole genome shotgun sequence (13915 bp)
Overview 1 RT 1: 7308-11036 bp Neighborhood of RT #1 [7308, 11036] DUF1380 RVT_N RVT-GII GIIM HNHc Feature: gene Location: 7308-7730 bp Feature: domain Description: DUF1380 Location: 7311-7605 bp Feature: domain Description: DUF1380 Location: 7311-7605 bp Feature: gene Location: 7727-7918 bp Feature: gene Location: 8232-9899 bp Feature: RT Description: RVT_N Location: 8280-8517 bp Feature: RT Description: RVT_N Location: 82 80-8517 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8568-9210 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8568-92 10 bp Feature: domain Description: GIIM Note: maturase Location: 9261-9495 bp Feature: domain Description: GIIM Note: maturase Location: 92 61-9495 bp Feature: domain Description: HNHc Note: nucleases Location: 9705-9864 bp Feature: domain Description: HNHc Note: nucleases Location: 9705-9864 bp Feature: gene Location: 10636-10811 bp Feature: gene Location: 10779-11036 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1380 (pfam07128), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: NLFC01000033.1 Klebsiella pneumoniae strain L79 L79_ctg033, whole genome shotgun sequence (1470 bp)
Overview 1 RT 1: 3-1020 bp Neighborhood of RT #1 [3, 1412] RVT-GII Feature: gene Location: 3-1412 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 330-1020 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 3 0-1020 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII