myRT

myRT report for GCA_002261675.1_ASM226167v1

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Seq: NLFA01000231.1 Klebsiella pneumoniae strain L69 L69_ctg231, whole genome shotgun sequence (42659 bp)
Overview 1 RT 1: 17504-23766 bp Neighborhood of RT #1 [17504, 23766] STKc_PknB_like RVT-Retrons AAA_15 Feature: gene Location: 17504-18607 bp Feature: domain Description: STKc_PknB_like Location: 17636-18077 bp Feature: domain Description: STKc_PknB_like Location: 1 7636-1 8077 bp Feature: gene Location: 18677-18919 bp Feature: gene Location: 19166-20266 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 19349-19877 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 9349-1 9877 bp Feature: gene Location: 20381-22657 bp Feature: domain Description: AAA_15 Location: 20414-21422 bp Feature: domain Description: AAA_1 5 Location: 2041 4-21 422 bp Feature: gene Location: 23536-23766 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT STKc_PknB_like (cd14014), RVT-Retrons, AAA_15 (pfam13175)

Seq: NLFA01000062.1 Klebsiella pneumoniae strain L69 L69_ctg062, whole genome shotgun sequence (1369 bp)
Overview 1 RT 1: 59-938 bp Neighborhood of RT #1 [59, 1330] RVT-GII Feature: gene Location: 59-1330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 248-938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 48-938 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NLFA01000077.1 Klebsiella pneumoniae strain L69 L69_ctg077, whole genome shotgun sequence (2344 bp)
Overview 1 RT 1: 595-2227 bp Neighborhood of RT #1 [595, 2262] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 595-2262 bp Feature: RT Description: RVT_N Location: 643-880 bp Feature: RT Description: RVT_N Location: 643 -880 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 931-1573 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93 1-1573 bp Feature: domain Description: GIIM Note: maturase Location: 1624-1858 bp Feature: domain Description: GIIM Note: maturase Location: 1624-1858 bp Feature: domain Description: HNHc Note: nucleases Location: 2068-2227 bp Feature: domain Description: HNHc Note: nucleases Location: 2068-2227 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)