myRT

myRT report for GCA_002261785.1_ASM226178v1

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Seq: NLEZ01000035.1 Klebsiella pneumoniae strain L63 L63_ctg035, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 1-1442 bp Neighborhood of RT #1 [1, 1834] RVT-GII Feature: gene Location: 1-217 bp Feature: gene Location: 350-1834 bp Ori: OZJ51965.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1 442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NLEZ01000016.1 Klebsiella pneumoniae strain L63 L63_ctg016, whole genome shotgun sequence (20618 bp)
Overview 1 RT 1: 4210-7412 bp Neighborhood of RT #1 [4210, 7845] RVT-GII GIIM PHA02517 Zn_Tnp_IS1 HTH_Tnp_IS1 Feature: gene Location: 4210-4647 bp Feature: gene Location: 4562-4870 bp Feature: gene Location: 4941-6464 bp Ori: OZJ53078.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5214-5946 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 14-5946 bp Feature: domain Description: GIIM Note: maturase Location: 6021-6219 bp Feature: domain Description: GIIM Note: maturase Location: 602 1-62 19 bp Feature: gene Location: 6545-6724 bp Feature: domain Description: PHA02517 Location: 6548-6725 bp Feature: domain Description: PHA02 517 Location: 6548-672 5 bp Feature: gene Location: 7148-7845 bp Feature: domain Description: Zn_Tnp_IS1 Location: 7154-7256 bp Feature: domain Description: Zn_Tnp_IS1 Location: 7154-72 56 bp Feature: domain Description: HTH_Tnp_IS1 Location: 7277-7412 bp Feature: domain Description: HTH_Tnp_IS1 Location: 72 77-7412 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), Zn_Tnp_IS1 (pfam03811), HTH_Tnp_IS1 (pfam12759)

Seq: NLEZ01000077.1 Klebsiella pneumoniae strain L63 L63_ctg077, whole genome shotgun sequence (29362 bp)
Overview 1 RT 1: 25608-29362 bp Neighborhood of RT #1 [25608, 29362] PRK10724 SmpB RVT-UG11 PRK09678 Feature: gene Location: 25608-26084 bp Ori: OZJ50698.1 Feature: domain Description: PRK10724 Location: 25614-26079 bp Feature: domain Description: PRK10724 Location: 25614-26079 bp Feature: gene Location: 26195-26677 bp Ori: OZJ50699.1 Feature: domain Description: SmpB Location: 26225-26669 bp Feature: domain Description: SmpB Location: 26225-26669 bp Feature: gene Location: 27293-28066 bp Ori: OZJ50700.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 27428-27881 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 27428-27881 bp Feature: gene Location: 28470-28688 bp Ori: OZJ50701.1 Feature: domain Description: PRK09678 Location: 28473-28671 bp Feature: domain Description: PRK09678 Location: 28473 -28671 bp Feature: gene Location: 28779-29362 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10724 (type II toxin-antitoxin system RatA family toxin), SmpB (pfam01668), RVT-UG11, PRK09678 (DNA-binding transcriptional regulator; Provisional)