myRT

myRT report for GCA_002261825.1_ASM226182v1

Download annotations/find similar RTs

Seq: NLEU01000053.1 Klebsiella pneumoniae strain L531 SPA_L531_ctg053, whole genome shotgun sequence (20281 bp)
Overview 1 RT 1: 7736-11464 bp Neighborhood of RT #1 [7736, 11464] DUF1380 RVT_N RVT-GII GIIM HNHc Feature: gene Location: 7736-8158 bp Feature: domain Description: DUF1380 Location: 7739-8033 bp Feature: domain Description: DUF1 380 Location: 7739-8033 bp Feature: gene Location: 8155-8346 bp Feature: gene Location: 8660-10327 bp Feature: RT Description: RVT_N Location: 8708-8945 bp Feature: RT Description: RVT_N Location: 8708-8945 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8996-9638 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8996-9638 bp Feature: domain Description: GIIM Note: maturase Location: 9689-9923 bp Feature: domain Description: GIIM Note: maturase Location: 9689-9923 bp Feature: domain Description: HNHc Note: nucleases Location: 10133-10292 bp Feature: domain Description: HNHc Note: nucleases Location: 1 01 33-1 0292 bp Feature: gene Location: 11064-11239 bp Feature: gene Location: 11207-11464 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1380 (pfam07128), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: NLEU01000088.1 Klebsiella pneumoniae strain L531 SPA_L531_ctg088, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 1-1442 bp Neighborhood of RT #1 [1, 1834] RVT-GII Feature: gene Location: 1-217 bp Feature: gene Location: 350-1834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752 -1442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NLEU01000006.1 Klebsiella pneumoniae strain L531 SPA_L531_ctg006, whole genome shotgun sequence (263644 bp)
Overview 1 RT 1: 239875-245607 bp Neighborhood of RT #1 [239875, 246137] AAA_15 RVT-Retrons STKc_PknB_like Feature: gene Location: 239875-240105 bp Feature: gene Location: 240984-243260 bp Feature: domain Description: AAA_15 Location: 241017-242025 bp Feature: domain Description: AAA_15 Location: 241017-242025 bp Feature: gene Location: 243375-244475 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 243558-244086 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 243 558-244086 bp Feature: gene Location: 244722-244964 bp Feature: gene Location: 245034-246137 bp Feature: domain Description: STKc_PknB_like Location: 245166-245607 bp Feature: domain Description: STKc_PknB_like Location: 245166-245607 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, STKc_PknB_like (cd14014)