myRT

myRT report for GCA_002261855.1_ASM226185v1

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Seq: NLEV01000008.1 Klebsiella pneumoniae strain L535 SPA_L535_ctg008, whole genome shotgun sequence (329886 bp)
Overview 1 RT 1: 250308-255189 bp Neighborhood of RT #1 [250308, 255191] umuC RVT-UG11 PRK09951 PRK15110 Feature: gene Location: 250308-251573 bp Ori: OZJ74712.1 Feature: domain Description: umuC Location: 250311-251571 bp Feature: domain Description: umuC Location: 25031 1 -251 571 bp Feature: gene Location: 251729-251986 bp Feature: gene Location: 252525-253154 bp Ori: OZJ74818.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 252528-252975 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 252528-252975 bp Feature: gene Location: 253355-254021 bp Feature: domain Description: PRK09951 Location: 253358-253508 bp Feature: domain Description: PRK09951 Location: 253358-253508 bp Feature: gene Location: 254226-255191 bp Ori: OZJ74714.1 Feature: domain Description: PRK15110 Location: 254229-255189 bp Feature: domain Description: PRK1 51 1 0 Location: 254229-2551 89 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), RVT-UG11, PRK09951 (hypothetical protein; Provisional), PRK15110 (peptide ABC transporter permease SapB)

Seq: NLEV01000029.1 Klebsiella pneumoniae strain L535 SPA_L535_ctg029, whole genome shotgun sequence (15238 bp)
Overview 1 RT 1: 53-3255 bp Neighborhood of RT #1 [53, 3688] RVT-GII GIIM PHA02517 Zn_Tnp_IS1 HTH_Tnp_IS1 Feature: gene Location: 53-490 bp Feature: gene Location: 405-713 bp Feature: gene Location: 784-2307 bp Ori: OZJ72391.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1057-1789 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1057-1789 bp Feature: domain Description: GIIM Note: maturase Location: 1864-2062 bp Feature: domain Description: GIIM Note: maturase Location: 1864-2 062 bp Feature: gene Location: 2388-2567 bp Feature: domain Description: PHA02517 Location: 2391-2568 bp Feature: domain Description: PHA02 517 Location: 2 391-2 568 bp Feature: gene Location: 2991-3688 bp Feature: domain Description: Zn_Tnp_IS1 Location: 2997-3099 bp Feature: domain Description: Zn_Tnp_IS1 Location: 2 997-3099 bp Feature: domain Description: HTH_Tnp_IS1 Location: 3120-3255 bp Feature: domain Description: HTH_Tnp_IS1 Location: 312 0-32 55 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), Zn_Tnp_IS1 (pfam03811), HTH_Tnp_IS1 (pfam12759)

Seq: NLEV01000048.1 Klebsiella pneumoniae strain L535 SPA_L535_ctg048, whole genome shotgun sequence (1894 bp)
Overview 1 RT 1: 1-1442 bp Neighborhood of RT #1 [1, 1834] RVT-GII Feature: gene Location: 1-217 bp Feature: gene Location: 350-1834 bp Ori: OZJ72233.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII