myRT

myRT report for GCA_002261915.1_ASM226191v1

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Seq: NLEP01000008.1 Klebsiella pneumoniae strain L520 SPA_L520_ctg008, whole genome shotgun sequence (329886 bp)
Overview 1 RT 1: 250308-255189 bp Neighborhood of RT #1 [250308, 255191] umuC RVT-UG11 PRK09951 PRK15110 Feature: gene Location: 250308-251573 bp Ori: OZK07664.1 Feature: domain Description: umuC Location: 250311-251571 bp Feature: domain Description: umuC Location: 25031 1 -251 571 bp Feature: gene Location: 251729-251986 bp Feature: gene Location: 252525-253154 bp Ori: OZK07769.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 252528-252975 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 252528-252975 bp Feature: gene Location: 253355-254021 bp Feature: domain Description: PRK09951 Location: 253358-253508 bp Feature: domain Description: PRK09951 Location: 253358-253508 bp Feature: gene Location: 254226-255191 bp Ori: OZK07666.1 Feature: domain Description: PRK15110 Location: 254229-255189 bp Feature: domain Description: PRK1 51 1 0 Location: 254229-2551 89 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), RVT-UG11, PRK09951 (hypothetical protein; Provisional), PRK15110 (peptide ABC transporter permease SapB)

Seq: NLEP01000047.1 Klebsiella pneumoniae strain L520 SPA_L520_ctg047, whole genome shotgun sequence (1894 bp)
Overview 1 RT 1: 1-1442 bp Neighborhood of RT #1 [1, 1834] RVT-GII Feature: gene Location: 1-217 bp Feature: gene Location: 350-1834 bp Ori: OZK05184.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752 -1442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NLEP01000029.1 Klebsiella pneumoniae strain L520 SPA_L520_ctg029, whole genome shotgun sequence (16138 bp)
Overview 1 RT 1: 11551-15186 bp Neighborhood of RT #1 [11551, 15186] Zn_Tnp_IS1 HTH_Tnp_IS1 PHA02517 RVT-GII GIIM Feature: gene Location: 11551-12248 bp Feature: domain Description: Zn_Tnp_IS1 Location: 11557-11659 bp Feature: domain Description: Zn_Tnp_IS1 Location: 11557-11659 bp Feature: domain Description: HTH_Tnp_IS1 Location: 11680-11815 bp Feature: domain Description: HTH_Tnp_IS1 Location: 11680-11815 bp Feature: gene Location: 12672-12851 bp Feature: domain Description: PHA02517 Location: 12675-12852 bp Feature: domain Description: PHA02517 Location: 12675-12852 bp Feature: gene Location: 12932-14455 bp Ori: OZK05317.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13205-13937 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 205-13 93 7 bp Feature: domain Description: GIIM Note: maturase Location: 14012-14210 bp Feature: domain Description: GIIM Note: maturase Location: 14012-14210 bp Feature: gene Location: 14526-14834 bp Feature: gene Location: 14749-15186 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Zn_Tnp_IS1 (pfam03811), HTH_Tnp_IS1 (pfam12759), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)