myRT

myRT report for GCA_002262065.1_ASM226206v1

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Seq: NLEH01000079.1 Klebsiella pneumoniae strain L482 SPA_L482_ctg079, whole genome shotgun sequence (2903 bp)
Overview 1 RT 1: 595-2767 bp Neighborhood of RT #1 [595, 2767] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 595-2262 bp Feature: RT Description: RVT_N Location: 643-880 bp Feature: RT Description: RVT_N Location: 643-880 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 931-1573 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 931 -1 573 bp Feature: domain Description: GIIM Note: maturase Location: 1624-1858 bp Feature: domain Description: GIIM Note: maturase Location: 1 624-1 858 bp Feature: domain Description: HNHc Note: nucleases Location: 2068-2227 bp Feature: domain Description: HNHc Note: nucleases Location: 2068-2227 bp Feature: gene Location: 2576-2767 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: NLEH01000006.1 Klebsiella pneumoniae strain L482 SPA_L482_ctg006, whole genome shotgun sequence (235117 bp)
Overview 1 RT 1: 211348-217080 bp Neighborhood of RT #1 [211348, 217610] AAA_15 RVT-Retrons STKc_PknB_like Feature: gene Location: 211348-211578 bp Feature: gene Location: 212457-214733 bp Feature: domain Description: AAA_15 Location: 212490-213498 bp Feature: domain Description: AAA_15 Location: 2 12 490-2 13498 bp Feature: gene Location: 214848-215948 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 215031-215559 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 15031-2 15559 bp Feature: gene Location: 216195-216437 bp Feature: gene Location: 216507-217610 bp Feature: domain Description: STKc_PknB_like Location: 216639-217080 bp Feature: domain Description: STKc_PknB_like Location: 2 16639-2 17080 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, STKc_PknB_like (cd14014)

Seq: NLEH01000086.1 Klebsiella pneumoniae strain L482 SPA_L482_ctg086, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 1-1442 bp Neighborhood of RT #1 [1, 1834] RVT-GII Feature: gene Location: 1-217 bp Feature: gene Location: 350-1834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII