myRT

myRT report for GCA_002262225.1_ASM226222v1

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Seq: NLDY01000059.1 Klebsiella pneumoniae strain L388 SPA_L388_ctg059, whole genome shotgun sequence (13922 bp)
Overview 1 RT 1: 2883-6486 bp Neighborhood of RT #1 [2883, 6611] RVT_N RVT-GII GIIM HNHc DUF1380 Feature: gene Location: 2883-3140 bp Feature: gene Location: 3108-3283 bp Feature: gene Location: 4020-5687 bp Feature: RT Description: RVT_N Location: 4068-4305 bp Feature: RT Description: RVT_N Location: 4068-4305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4356-4998 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4356-4998 bp Feature: domain Description: GIIM Note: maturase Location: 5049-5283 bp Feature: domain Description: GIIM Note: maturase Location: 5049-5283 bp Feature: domain Description: HNHc Note: nucleases Location: 5493-5652 bp Feature: domain Description: HNHc Note: nucleases Location: 5493-5652 bp Feature: gene Location: 6001-6192 bp Feature: gene Location: 6189-6611 bp Feature: domain Description: DUF1380 Location: 6192-6486 bp Feature: domain Description: DUF1 380 Location: 61 92-6486 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF1380 (pfam07128)

Seq: NLDY01000048.1 Klebsiella pneumoniae strain L388 SPA_L388_ctg048, whole genome shotgun sequence (24183 bp)
Overview 1 RT 1: 414-6146 bp Neighborhood of RT #1 [414, 6676] AAA_15 RVT-Retrons STKc_PknB_like Feature: gene Location: 414-644 bp Feature: gene Location: 1523-3799 bp Feature: domain Description: AAA_15 Location: 1556-2564 bp Feature: domain Description: AAA_15 Location: 1556-2 564 bp Feature: gene Location: 3914-5014 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4097-4625 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4097-462 5 bp Feature: gene Location: 5261-5503 bp Feature: gene Location: 5573-6676 bp Feature: domain Description: STKc_PknB_like Location: 5705-6146 bp Feature: domain Description: STKc_PknB_like Location: 5705-6146 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, STKc_PknB_like (cd14014)