myRT

myRT report for GCA_002262235.1_ASM226223v1

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Seq: NLDZ01000053.1 Klebsiella pneumoniae strain L39 SPA_L39_ctg053, whole genome shotgun sequence (19857 bp)
Overview 1 RT 1: 7312-11040 bp Neighborhood of RT #1 [7312, 11040] DUF1380 RVT_N RVT-GII GIIM HNHc Feature: gene Location: 7312-7734 bp Feature: domain Description: DUF1380 Location: 7315-7609 bp Feature: domain Description: DUF1 380 Location: 731 5-7609 bp Feature: gene Location: 7731-7922 bp Feature: gene Location: 8236-9903 bp Feature: RT Description: RVT_N Location: 8284-8521 bp Feature: RT Description: RVT_N Location: 8284-8521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8572-9214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8572-921 4 bp Feature: domain Description: GIIM Note: maturase Location: 9265-9499 bp Feature: domain Description: GIIM Note: maturase Location: 9265-9499 bp Feature: domain Description: HNHc Note: nucleases Location: 9709-9868 bp Feature: domain Description: HNHc Note: nucleases Location: 9709-9868 bp Feature: gene Location: 10640-10815 bp Feature: gene Location: 10783-11040 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1380 (pfam07128), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: NLDZ01000006.1 Klebsiella pneumoniae strain L39 SPA_L39_ctg006, whole genome shotgun sequence (263644 bp)
Overview 1 RT 1: 239875-245607 bp Neighborhood of RT #1 [239875, 246137] AAA_15 RVT-Retrons STKc_PknB_like Feature: gene Location: 239875-240105 bp Feature: gene Location: 240984-243260 bp Feature: domain Description: AAA_15 Location: 241017-242025 bp Feature: domain Description: AAA_15 Location: 2 41017-2 42 02 5 bp Feature: gene Location: 243375-244475 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 243558-244086 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 43558-2 44086 bp Feature: gene Location: 244722-244964 bp Feature: gene Location: 245034-246137 bp Feature: domain Description: STKc_PknB_like Location: 245166-245607 bp Feature: domain Description: STKc_PknB_like Location: 2 45166-2 45607 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, STKc_PknB_like (cd14014)

Seq: NLDZ01000085.1 Klebsiella pneumoniae strain L39 SPA_L39_ctg085, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 1-1442 bp Neighborhood of RT #1 [1, 1834] RVT-GII Feature: gene Location: 1-217 bp Feature: gene Location: 350-1834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII