myRT

myRT report for GCA_002262385.1_ASM226238v1

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Seq: NLDS01000031.1 Klebsiella pneumoniae strain L36 SPA_L36_ctg031, whole genome shotgun sequence (28697 bp)
Overview 1 RT 1: 25642-28642 bp Neighborhood of RT #1 [25642, 28659] PRK10724 SmpB RVT-UG11 PRK09678 Feature: gene Location: 25642-26118 bp Ori: OZL33276.1 Feature: domain Description: PRK10724 Location: 25648-26113 bp Feature: domain Description: PRK1 0724 Location: 25648-261 1 3 bp Feature: gene Location: 26229-26711 bp Ori: OZL33277.1 Feature: domain Description: SmpB Location: 26259-26703 bp Feature: domain Description: SmpB Location: 26259-26703 bp Feature: gene Location: 27327-28100 bp Ori: OZL33278.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 27462-27915 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 27462-2791 5 bp Feature: gene Location: 28504-28659 bp Ori: OZL33279.1 Feature: domain Description: PRK09678 Location: 28510-28642 bp Feature: domain Description: PRK09678 Location: 2851 0-28642 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10724 (type II toxin-antitoxin system RatA family toxin), SmpB (pfam01668), RVT-UG11, PRK09678 (DNA-binding transcriptional regulator; Provisional)

Seq: NLDS01000036.1 Klebsiella pneumoniae strain L36 SPA_L36_ctg036, whole genome shotgun sequence (20624 bp)
Overview 1 RT 1: 12777-16412 bp Neighborhood of RT #1 [12777, 16412] Zn_Tnp_IS1 HTH_Tnp_IS1 PHA02517 RVT-GII GIIM Feature: gene Location: 12777-13474 bp Feature: domain Description: Zn_Tnp_IS1 Location: 12783-12885 bp Feature: domain Description: Zn_Tnp_IS1 Location: 12 783-12 885 bp Feature: domain Description: HTH_Tnp_IS1 Location: 12906-13041 bp Feature: domain Description: HTH_Tnp_IS1 Location: 12 906-13041 bp Feature: gene Location: 13898-14077 bp Feature: domain Description: PHA02517 Location: 13901-14078 bp Feature: domain Description: PHA02 517 Location: 13901-14078 bp Feature: gene Location: 14158-15681 bp Ori: OZL33122.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14431-15163 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14431-15163 bp Feature: domain Description: GIIM Note: maturase Location: 15238-15436 bp Feature: domain Description: GIIM Note: maturase Location: 152 38-15436 bp Feature: gene Location: 15752-16060 bp Feature: gene Location: 15975-16412 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Zn_Tnp_IS1 (pfam03811), HTH_Tnp_IS1 (pfam12759), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: NLDS01000054.1 Klebsiella pneumoniae strain L36 SPA_L36_ctg054, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 1-1442 bp Neighborhood of RT #1 [1, 1834] RVT-GII Feature: gene Location: 1-217 bp Feature: gene Location: 350-1834 bp Ori: OZL32937.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII