myRT

myRT report for GCA_002262565.1_ASM226256v1

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Seq: NLDL01000034.1 Klebsiella pneumoniae strain L23 SPA_L23_ctg034, whole genome shotgun sequence (20624 bp)
Overview 1 RT 1: 12777-16412 bp Neighborhood of RT #1 [12777, 16412] Zn_Tnp_IS1 HTH_Tnp_IS1 PHA02517 RVT-GII GIIM Feature: gene Location: 12777-13474 bp Feature: domain Description: Zn_Tnp_IS1 Location: 12783-12885 bp Feature: domain Description: Zn_Tnp_IS1 Location: 1 2783-1 2885 bp Feature: domain Description: HTH_Tnp_IS1 Location: 12906-13041 bp Feature: domain Description: HTH_Tnp_IS1 Location: 1 2906-1 3041 bp Feature: gene Location: 13898-14077 bp Feature: domain Description: PHA02517 Location: 13901-14078 bp Feature: domain Description: PHA0251 7 Location: 1 3901 -1 4078 bp Feature: gene Location: 14158-15681 bp Ori: OZL72505.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14431-15163 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4431 -1 51 63 bp Feature: domain Description: GIIM Note: maturase Location: 15238-15436 bp Feature: domain Description: GIIM Note: maturase Location: 1 5238-1 5436 bp Feature: gene Location: 15752-16060 bp Feature: gene Location: 15975-16412 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Zn_Tnp_IS1 (pfam03811), HTH_Tnp_IS1 (pfam12759), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: NLDL01000028.1 Klebsiella pneumoniae strain L23 SPA_L23_ctg028, whole genome shotgun sequence (28970 bp)
Overview 1 RT 1: 249-3324 bp Neighborhood of RT #1 [249, 3329] PRK09678 RVT-UG11 SmpB PRK10724 Feature: gene Location: 249-467 bp Ori: OZL72664.1 Feature: domain Description: PRK09678 Location: 252-450 bp Feature: domain Description: PRK09678 Location: 2 52 -450 bp Feature: gene Location: 871-1644 bp Ori: OZL72665.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 1006-1459 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 1006-1459 bp Feature: gene Location: 2260-2742 bp Ori: OZL72666.1 Feature: domain Description: SmpB Location: 2290-2734 bp Feature: domain Description: SmpB Location: 2 2 90-2 734 bp Feature: gene Location: 2853-3329 bp Ori: OZL72667.1 Feature: domain Description: PRK10724 Location: 2859-3324 bp Feature: domain Description: PRK1072 4 Location: 2 859-332 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG11, SmpB (pfam01668), PRK10724 (type II toxin-antitoxin system RatA family toxin)

Seq: NLDL01000052.1 Klebsiella pneumoniae strain L23 SPA_L23_ctg052, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 1-1442 bp Neighborhood of RT #1 [1, 1834] RVT-GII Feature: gene Location: 1-217 bp Feature: gene Location: 350-1834 bp Ori: OZL72324.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII