myRT

myRT report for GCA_002262615.1_ASM226261v1

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Seq: NLDE01000090.1 Klebsiella pneumoniae strain L182 SPA_L182_ctg090, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 1-1442 bp Neighborhood of RT #1 [1, 1834] RVT-GII Feature: gene Location: 1-217 bp Feature: gene Location: 350-1834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1 442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NLDE01000006.1 Klebsiella pneumoniae strain L182 SPA_L182_ctg006, whole genome shotgun sequence (263644 bp)
Overview 1 RT 1: 239875-245607 bp Neighborhood of RT #1 [239875, 246137] AAA_15 RVT-Retrons STKc_PknB_like Feature: gene Location: 239875-240105 bp Feature: gene Location: 240984-243260 bp Feature: domain Description: AAA_15 Location: 241017-242025 bp Feature: domain Description: AAA_15 Location: 2 41017-2 42 02 5 bp Feature: gene Location: 243375-244475 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 243558-244086 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 43558-2 44086 bp Feature: gene Location: 244722-244964 bp Feature: gene Location: 245034-246137 bp Feature: domain Description: STKc_PknB_like Location: 245166-245607 bp Feature: domain Description: STKc_PknB_like Location: 2 45166-2 45607 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, STKc_PknB_like (cd14014)

Seq: NLDE01000056.1 Klebsiella pneumoniae strain L182 SPA_L182_ctg056, whole genome shotgun sequence (13922 bp)
Overview 1 RT 1: 2883-6486 bp Neighborhood of RT #1 [2883, 6611] RVT_N RVT-GII GIIM HNHc DUF1380 Feature: gene Location: 2883-3140 bp Feature: gene Location: 3108-3283 bp Feature: gene Location: 4020-5687 bp Feature: RT Description: RVT_N Location: 4068-4305 bp Feature: RT Description: RVT_N Location: 4068-43 05 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4356-4998 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43 56-4998 bp Feature: domain Description: GIIM Note: maturase Location: 5049-5283 bp Feature: domain Description: GIIM Note: maturase Location: 5049-5283 bp Feature: domain Description: HNHc Note: nucleases Location: 5493-5652 bp Feature: domain Description: HNHc Note: nucleases Location: 5493 -5652 bp Feature: gene Location: 6001-6192 bp Feature: gene Location: 6189-6611 bp Feature: domain Description: DUF1380 Location: 6192-6486 bp Feature: domain Description: DUF13 80 Location: 6192-6486 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF1380 (pfam07128)