myRT

myRT report for GCA_002262625.1_ASM226262v1

Download annotations/find similar RTs

Seq: NLDG01000167.1 Klebsiella pneumoniae strain L20 L20_ctg167, whole genome shotgun sequence (1689 bp)
Overview 1 RT 1: 147-1239 bp Neighborhood of RT #1 [147, 1631] RVT-GII Feature: gene Location: 147-1631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 549-1239 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 549-1 239 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NLDG01000019.1 Klebsiella pneumoniae strain L20 L20_ctg019, whole genome shotgun sequence (263644 bp)
Overview 1 RT 1: 17507-23769 bp Neighborhood of RT #1 [17507, 23769] STKc_PknB_like RVT-Retrons AAA_15 Feature: gene Location: 17507-18610 bp Feature: domain Description: STKc_PknB_like Location: 17639-18080 bp Feature: domain Description: STKc_PknB_like Location: 17639-18080 bp Feature: gene Location: 18680-18922 bp Feature: gene Location: 19169-20269 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 19352-19880 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 19352 -19880 bp Feature: gene Location: 20384-22660 bp Feature: domain Description: AAA_15 Location: 20417-21425 bp Feature: domain Description: AAA_15 Location: 2 0417-2 142 5 bp Feature: gene Location: 23539-23769 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT STKc_PknB_like (cd14014), RVT-Retrons, AAA_15 (pfam13175)

Seq: NLDG01000036.1 Klebsiella pneumoniae strain L20 L20_ctg036, whole genome shotgun sequence (13923 bp)
Overview 1 RT 1: 2884-6487 bp Neighborhood of RT #1 [2884, 6612] RVT_N RVT-GII GIIM HNHc DUF1380 Feature: gene Location: 2884-3141 bp Feature: gene Location: 3109-3284 bp Feature: gene Location: 4021-5688 bp Feature: RT Description: RVT_N Location: 4069-4306 bp Feature: RT Description: RVT_N Location: 4069-43 06 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4357-4999 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43 57-4999 bp Feature: domain Description: GIIM Note: maturase Location: 5050-5284 bp Feature: domain Description: GIIM Note: maturase Location: 5050-5284 bp Feature: domain Description: HNHc Note: nucleases Location: 5494-5653 bp Feature: domain Description: HNHc Note: nucleases Location: 5494-5653 bp Feature: gene Location: 6002-6193 bp Feature: gene Location: 6190-6612 bp Feature: domain Description: DUF1380 Location: 6193-6487 bp Feature: domain Description: DUF13 80 Location: 6193 -6487 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF1380 (pfam07128)