myRT

myRT report for GCA_002262745.1_ASM226274v1

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Seq: NLDB01000010.1 Klebsiella pneumoniae strain L142 SPA_L142_ctg010, whole genome shotgun sequence (185958 bp)
Overview 1 RT 1: 17508-23770 bp Neighborhood of RT #1 [17508, 23770] STKc_PknB_like RVT-Retrons AAA_15 Feature: gene Location: 17508-18611 bp Feature: domain Description: STKc_PknB_like Location: 17640-18081 bp Feature: domain Description: STKc_PknB_like Location: 1 7640-1 8081 bp Feature: gene Location: 18681-18923 bp Feature: gene Location: 19170-20270 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 19353-19881 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 9353-1 9881 bp Feature: gene Location: 20385-22661 bp Feature: domain Description: AAA_15 Location: 20418-21426 bp Feature: domain Description: AAA_1 5 Location: 2041 8-21 426 bp Feature: gene Location: 23540-23770 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT STKc_PknB_like (cd14014), RVT-Retrons, AAA_15 (pfam13175)

Seq: NLDB01000076.1 Klebsiella pneumoniae strain L142 SPA_L142_ctg076, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 1-1442 bp Neighborhood of RT #1 [1, 1834] RVT-GII Feature: gene Location: 1-217 bp Feature: gene Location: 350-1834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752 -1442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NLDB01000052.1 Klebsiella pneumoniae strain L142 SPA_L142_ctg052, whole genome shotgun sequence (13922 bp)
Overview 1 RT 1: 2883-6486 bp Neighborhood of RT #1 [2883, 6611] RVT_N RVT-GII GIIM HNHc DUF1380 Feature: gene Location: 2883-3140 bp Feature: gene Location: 3108-3283 bp Feature: gene Location: 4020-5687 bp Feature: RT Description: RVT_N Location: 4068-4305 bp Feature: RT Description: RVT_N Location: 4068-43 05 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4356-4998 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43 56-4998 bp Feature: domain Description: GIIM Note: maturase Location: 5049-5283 bp Feature: domain Description: GIIM Note: maturase Location: 5049-5283 bp Feature: domain Description: HNHc Note: nucleases Location: 5493-5652 bp Feature: domain Description: HNHc Note: nucleases Location: 5493 -5652 bp Feature: gene Location: 6001-6192 bp Feature: gene Location: 6189-6611 bp Feature: domain Description: DUF1380 Location: 6192-6486 bp Feature: domain Description: DUF13 80 Location: 6192-6486 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF1380 (pfam07128)