myRT

myRT report for GCA_002262775.1_ASM226277v1

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Seq: NLCZ01000074.1 Klebsiella pneumoniae strain L124 L124_ctg074, whole genome shotgun sequence (13924 bp)
Overview 1 RT 1: 7313-11041 bp Neighborhood of RT #1 [7313, 11041] DUF1380 RVT_N RVT-GII GIIM HNHc Feature: gene Location: 7313-7735 bp Feature: domain Description: DUF1380 Location: 7316-7610 bp Feature: domain Description: DUF1 380 Location: 731 6-761 0 bp Feature: gene Location: 7732-7923 bp Feature: gene Location: 8237-9904 bp Feature: RT Description: RVT_N Location: 8285-8522 bp Feature: RT Description: RVT_N Location: 8285-8522 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8573-9215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8573-921 5 bp Feature: domain Description: GIIM Note: maturase Location: 9266-9500 bp Feature: domain Description: GIIM Note: maturase Location: 9266-9500 bp Feature: domain Description: HNHc Note: nucleases Location: 9710-9869 bp Feature: domain Description: HNHc Note: nucleases Location: 971 0-9869 bp Feature: gene Location: 10641-10816 bp Feature: gene Location: 10784-11041 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1380 (pfam07128), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: NLCZ01000055.1 Klebsiella pneumoniae strain L124 L124_ctg055, whole genome shotgun sequence (10563 bp)
Overview 1 RT 1: 1241-4435 bp Neighborhood of RT #1 [1241, 4449] RVT-GII PRK10276 Feature: gene Location: 1241-1453 bp Feature: gene Location: 1623-1853 bp Feature: gene Location: 2087-3619 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2489-3227 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 489-32 2 7 bp Feature: gene Location: 3619-3870 bp Feature: gene Location: 4024-4449 bp Feature: domain Description: PRK10276 Location: 4027-4435 bp Feature: domain Description: PRK102 76 Location: 402 7-4435 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: NLCZ01000042.1 Klebsiella pneumoniae strain L124 L124_ctg042, whole genome shotgun sequence (263793 bp)
Overview 1 RT 1: 240024-245756 bp Neighborhood of RT #1 [240024, 246286] AAA_15 RVT-Retrons STKc_PknB_like Feature: gene Location: 240024-240254 bp Feature: gene Location: 241133-243409 bp Feature: domain Description: AAA_15 Location: 241166-242174 bp Feature: domain Description: AAA_15 Location: 241166-242174 bp Feature: gene Location: 243524-244624 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 243707-244235 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 243 707-24423 5 bp Feature: gene Location: 244871-245113 bp Feature: gene Location: 245183-246286 bp Feature: domain Description: STKc_PknB_like Location: 245315-245756 bp Feature: domain Description: STKc_PknB_like Location: 2453 15-245756 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, STKc_PknB_like (cd14014)

Seq: NLCZ01000071.1 Klebsiella pneumoniae strain L124 L124_ctg071, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 1-1442 bp Neighborhood of RT #1 [1, 1834] RVT-GII Feature: gene Location: 1-217 bp Feature: gene Location: 350-1834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-14 4 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII