myRT

myRT report for GCA_002262805.1_ASM226280v1

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Seq: NLCX01000057.1 Klebsiella pneumoniae strain L122 L122_ctg057, whole genome shotgun sequence (263793 bp)
Overview 1 RT 1: 17508-23770 bp Neighborhood of RT #1 [17508, 23770] STKc_PknB_like RVT-Retrons AAA_15 Feature: gene Location: 17508-18611 bp Feature: domain Description: STKc_PknB_like Location: 17640-18081 bp Feature: domain Description: STKc_PknB_like Location: 1 7640-1 8081 bp Feature: gene Location: 18681-18923 bp Feature: gene Location: 19170-20270 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 19353-19881 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 9353-1 9881 bp Feature: gene Location: 20385-22661 bp Feature: domain Description: AAA_15 Location: 20418-21426 bp Feature: domain Description: AAA_1 5 Location: 2041 8-21 426 bp Feature: gene Location: 23540-23770 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT STKc_PknB_like (cd14014), RVT-Retrons, AAA_15 (pfam13175)

Seq: NLCX01000096.1 Klebsiella pneumoniae strain L122 L122_ctg096, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 59-1794 bp Neighborhood of RT #1 [59, 1794] RVT-GII Feature: gene Location: 59-1543 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461-1151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461-1151 bp Feature: gene Location: 1543-1794 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NLCX01000063.1 Klebsiella pneumoniae strain L122 L122_ctg063, whole genome shotgun sequence (13924 bp)
Overview 1 RT 1: 7313-11041 bp Neighborhood of RT #1 [7313, 11041] DUF1380 RVT_N RVT-GII GIIM HNHc Feature: gene Location: 7313-7735 bp Feature: domain Description: DUF1380 Location: 7316-7610 bp Feature: domain Description: DUF13 80 Location: 73 16-7610 bp Feature: gene Location: 7732-7923 bp Feature: gene Location: 8237-9904 bp Feature: RT Description: RVT_N Location: 8285-8522 bp Feature: RT Description: RVT_N Location: 8285-8522 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8573-9215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8573 -9215 bp Feature: domain Description: GIIM Note: maturase Location: 9266-9500 bp Feature: domain Description: GIIM Note: maturase Location: 9266-9500 bp Feature: domain Description: HNHc Note: nucleases Location: 9710-9869 bp Feature: domain Description: HNHc Note: nucleases Location: 9710-9869 bp Feature: gene Location: 10641-10816 bp Feature: gene Location: 10784-11041 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1380 (pfam07128), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: NLCX01000084.1 Klebsiella pneumoniae strain L122 L122_ctg084, whole genome shotgun sequence (10563 bp)
Overview 1 RT 1: 1241-4435 bp Neighborhood of RT #1 [1241, 4449] RVT-GII PRK10276 Feature: gene Location: 1241-1453 bp Feature: gene Location: 1623-1853 bp Feature: gene Location: 2087-3619 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2489-3227 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24 89-3227 bp Feature: gene Location: 3619-3870 bp Feature: gene Location: 4024-4449 bp Feature: domain Description: PRK10276 Location: 4027-4435 bp Feature: domain Description: PRK10276 Location: 4 027-4 4 35 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)