myRT

myRT report for GCA_002263135.2_ASM226313v2

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Seq: NOVL02000016.1 Salmonella enterica subsp. enterica serovar Newport strain CFSAN051025 CFSAN05102516, whole genome shotgun sequence (81365 bp)
Overview 1 RT 1: 31372-35052 bp Neighborhood of RT #1 [31372, 35052] Arm-DNA-bind_3 INT_P4_C RVT-Retrons Feature: gene Location: 31372-31701 bp Feature: domain Description: Arm-DNA-bind_3 Location: 31381-31636 bp Feature: domain Description: Arm-DNA-bind_3 Location: 31 381 -31 636 bp Feature: gene Location: 31710-32216 bp Ori: RIO97295.1 Feature: domain Description: INT_P4_C Location: 31713-32148 bp Feature: domain Description: INT_P4_C Location: 31 71 3-321 48 bp Feature: gene Location: 32298-33230 bp Ori: RIO97338.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 32454-32997 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 32454-32997 bp Feature: gene Location: 33556-34425 bp Feature: gene Location: 34843-35052 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_3 (pfam13356), INT_P4_C (cd00801), RVT-Retrons

Seq: NOVL02000002.1 Salmonella enterica subsp. enterica serovar Newport strain CFSAN051025 CFSAN0510252, whole genome shotgun sequence (477784 bp)
Overview 1 RT 1: 388229-395111 bp Neighborhood of RT #1 [388229, 395111] reactive_PduG Tra5 RVT-UG8 RVT-UG3 PRK09678 Feature: gene Location: 388229-388943 bp Feature: domain Description: reactive_PduG Location: 388232-388514 bp Feature: domain Description: reactive_PduG Location: 3882 32 -388514 bp Feature: gene Location: 388945-389724 bp Feature: domain Description: Tra5 Location: 389017-389719 bp Feature: domain Description: Tra5 Location: 389017-389719 bp Feature: gene Location: 390404-392422 bp Ori: RIP05000.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 390977-391430 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 390977-391430 bp Feature: gene Location: 392413-393690 bp Ori: RIP05001.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 392701-393196 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 392 701-393196 bp Feature: gene Location: 394078-394350 bp Ori: RIP05002.1 Feature: domain Description: PRK09678 Location: 394087-394243 bp Feature: domain Description: PRK09678 Location: 394087-3942 43 bp Feature: gene Location: 394350-395111 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT reactive_PduG (TIGR04491), Tra5 (COG2801), RVT-UG8, RVT-UG3, PRK09678 (DNA-binding transcriptional regulator; Provisional)