myRT

myRT report for GCA_002263375.1_ASM226337v1

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Seq: NPII01000004.1 Klebsiella pneumoniae strain SCPM-O-B-8045 (KPB-1470/16) NODE_4_length_290502_cov_10.914, whole genome shotgun sequence (290502 bp)
Overview 1 RT 1: 43335-48218 bp Neighborhood of RT #1 [43335, 48220] umuC RVT-UG11 PRK09951 PRK15110 Feature: gene Location: 43335-44600 bp Ori: OZN59518.1 Feature: domain Description: umuC Location: 43338-44598 bp Feature: domain Description: umuC Location: 43338-44598 bp Feature: gene Location: 44756-45013 bp Feature: gene Location: 45552-46181 bp Ori: OZN59743.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 45555-46002 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 45555-46002 bp Feature: gene Location: 46382-47050 bp Ori: OZN59520.1 Feature: domain Description: PRK09951 Location: 46385-47048 bp Feature: domain Description: PRK09951 Location: 46385-47048 bp Feature: gene Location: 47255-48220 bp Ori: OZN59521.1 Feature: domain Description: PRK15110 Location: 47258-48218 bp Feature: domain Description: PRK1 51 1 0 Location: 47258-4821 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), RVT-UG11, PRK09951 (hypothetical protein; Provisional), PRK15110 (peptide ABC transporter permease SapB)

Seq: NPII01000043.1 Klebsiella pneumoniae strain SCPM-O-B-8045 (KPB-1470/16) NODE_43_length_8583_cov_11.6795, whole genome shotgun sequence (8583 bp)
Overview 1 RT 1: 5397-8457 bp Neighborhood of RT #1 [5397, 8457] DinI HTH_XRE RVT-Retrons Feature: gene Location: 5397-5837 bp Ori: OZN55932.1 Feature: domain Description: DinI Location: 5652-5835 bp Feature: domain Description: DinI Location: 5652 -5835 bp Feature: gene Location: 6458-6766 bp Ori: OZN55933.1 Feature: domain Description: HTH_XRE Location: 6470-6635 bp Feature: domain Description: HTH_XRE Location: 6470-6635 bp Feature: gene Location: 6744-7694 bp Ori: OZN55934.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6924-7467 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 692 4-7467 bp Feature: gene Location: 7833-8264 bp Feature: gene Location: 8263-8457 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), HTH_XRE (smart00530), RVT-Retrons