myRT

myRT report for GCA_002263455.1_ASM226345v1

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Seq: NMPW01000035.1 Pseudomonas aeruginosa strain 00041437 000-41437_S88_R1_contig_35, whole genome shotgun sequence (133570 bp)
Overview 1 RT 1: 70842-79989 bp Neighborhood of RT #1 [70842, 79989] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH HipA_C Feature: gene Location: 70842-72695 bp Feature: domain Description: PRK05658 Location: 70854-72693 bp Feature: domain Description: PRK05658 Location: 70854-72693 bp Feature: gene Location: 72802-76539 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 72910-73567 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 7291 0-73567 bp Feature: domain Description: PRK09776 Location: 73780-74251 bp Feature: domain Description: PRK09776 Location: 73780-74251 bp Feature: domain Description: PAS Location: 74296-74833 bp Feature: domain Description: PAS Location: 74296-74833 bp Feature: domain Description: PRK10060 Location: 74842-76489 bp Feature: domain Description: PRK1 0060 Location: 74842-76489 bp Feature: gene Location: 77620-79305 bp Feature: RT Description: RVT_N Location: 77677-77917 bp Feature: RT Description: RVT_N Location: 77677-7791 7 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77965-78601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77965-78601 bp Feature: domain Description: GIIM Note: maturase Location: 78655-78886 bp Feature: domain Description: GIIM Note: maturase Location: 78655-78886 bp Feature: domain Description: HNH Note: nucleases Location: 79138-79276 bp Feature: domain Description: HNH Note: nucleases Location: 791 38-79276 bp Feature: gene Location: 79609-79926 bp Feature: domain Description: HipA_C Location: 79642-79810 bp Feature: domain Description: HipA_C Location: 79642-7981 0 bp Feature: gene Location: 79912-79989 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05658 (RNA polymerase sigma factor RpoD; Validated), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), HipA_C (pfam07804)