myRT

myRT report for GCA_002263545.1_ASM226354v1

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Seq: NMRU01000003.1 Pseudomonas aeruginosa strain Ocean-1170 unitig_2, whole genome shotgun sequence (25430 bp)

Associated domains:myRT KfrA_N (pfam11740), RPA (pfam10134), VagC (COG4456), COG1430 (Uncharacterized conserved membrane protein, UPF0127 family ), RVT-GII, GIIM (pfam08388), TraI_TIGR (TIGR02760)

Seq: NMRU01000001.1 Pseudomonas aeruginosa strain Ocean-1170 unitig_0, whole genome shotgun sequence (6967633 bp)

Associated domains:myRT RVT-GII, GIIM (pfam08388), COG3179 (Predicted chitinase ), DadA (COG0665), DUF1329 (pfam07044), DUF1302 (pfam06980), DUF1656 (pfam07869), FUSC (pfam04632), AlkB (COG3145), PRK09951 (hypothetical protein; Provisional)
Phage_lysis (pfam03245), Phage_Nu1 (pfam07471), Phage_holin_3_5 (pfam16085), COG4643 (Uncharacterized domain associated with phage/plasmid primase ), COG5545 (Predicted P-loop ATPase and inactivated derivatives ), mutS1 (TIGR01070), PreA (COG1146), DUF3470 (pfam11953), PRK05657 (RNA polymerase sigma factor RpoS; Validated), nlpD (PRK10871)
MFS (cl28910), Cupin_2 (pfam07883), AraC (COG2207), DUF2474 (pfam10617), AppB (COG1294), C4_traR_proteo (TIGR02419), YiiM (COG2258), LysR (COG0583), Crp (pfam00325), PRK10504 (putative transporter; Provisional)
COG4067 (Uncharacterized conserved protein ), CspC (COG1278), PRK11776 (ATP-dependent RNA helicase DbpA; Provisional), OprD (pfam03573), PRK08942 (D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase), PlsC (smart00563), gyrB (TIGR01059), recf (TIGR00611), GppA (COG0248), trxA (PRK09381)
Rho (COG1158), OafA (COG1835), FhaC (COG2831), MFS_MefA_like (cd06173), type_IV_pilB (TIGR02538), PilA (COG4969), PRK05742 (carboxylating nicotinate-nucleotide diphosphorylase), DUF1631 (pfam07793), Phage_antitermQ (pfam06530), Phage_holin_3_1 (pfam05106)
PRK15000 (peroxiredoxin C), PRK10262 (thioredoxin reductase; Provisional), MAPEG (pfam01124), PRK06110 (threonine dehydratase), PRK10238 (aromatic amino acid transporter AroP), PRK13792 (lysozyme inhibitor; Provisional), PRK09256 (aminoacyl-tRNA hydrolase), pbpG (PRK11669), PRK09640 (RNA polymerase sigma factor SigX; Reviewed), OprF (pfam05736)
OmpA_C-like (cl30079), PRK06136 (uroporphyrinogen-III C-methyltransferase), MopB_Nitrate-R-NapA-like (cd02754), formate-DH-alph (TIGR01553), Fer2_BFD (pfam04324), MiaE (pfam06175), Band_7 (pfam01145), HflC (COG0330), lipid_A_lpxH (TIGR01854)