myRT

myRT report for GCA_002264105.1_ASM226410v1

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Seq: NPGI01000004.1 Serratia marcescens strain SE768 NODE_4_length_305234_cov_63.0556, whole genome shotgun sequence (305234 bp)
Overview 1 RT 1: 172785-178143 bp 2 RT 2: 184920-189026 bp Neighborhood of RT #1 [172785, 178328] HTH_1 PBP2_DntR_like_1 PRK10819 RVT-Retrons YafY Neighborhood of RT #2 [184920, 189034] RVT-Retrons PRK09692 Feature: gene Location: 172785-173687 bp Feature: domain Description: HTH_1 Location: 172809-172980 bp Feature: domain Description: HTH_1 Location: 1 72809-1 72980 bp Feature: domain Description: PBP2_DntR_like_1 Location: 173076-173667 bp Feature: domain Description: PBP2_DntR_like_1 Location: 1 73076-1 73667 bp Feature: gene Location: 173903-174274 bp Feature: domain Description: PRK10819 Location: 173984-174227 bp Feature: domain Description: PRK1 081 9 Location: 1 73984-1 74227 bp Feature: gene Location: 174568-175518 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 174667-175258 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 74667-1 75258 bp Feature: gene Location: 175505-176458 bp Feature: gene Location: 177567-178328 bp Feature: domain Description: YafY Location: 177807-178143 bp Feature: domain Description: YafY Location: 1 77807-1 781 43 bp Feature: gene Location: 184920-185132 bp Feature: gene Location: 185459-186439 bp Feature: gene Location: 186426-187352 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 186531-187113 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 86531 -1 871 1 3 bp Feature: gene Location: 187349-187831 bp Feature: gene Location: 187868-189034 bp Feature: domain Description: PRK09692 Location: 187877-189026 bp Feature: domain Description: PRK09692 Location: 1 87877-1 89026 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_1 (pfam00126), PBP2_DntR_like_1 (cd08460), PRK10819 (transport protein TonB; Provisional), RVT-Retrons, YafY (COG2378), PRK09692 (Integrase; provisional)