myRT

myRT report for GCA_002264165.1_ASM226416v1

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Seq: NOJX01000042.1 Klebsiella pneumoniae strain TRKP1 K23_contig_45, whole genome shotgun sequence (2000 bp)
Overview 1 RT 1: 59-1794 bp Neighborhood of RT #1 [59, 1794] RVT-GII Feature: gene Location: 59-1543 bp Ori: OZP35328.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461-1151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461 -1 1 51 bp Feature: gene Location: 1543-1794 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NOJX01000012.1 Klebsiella pneumoniae strain TRKP1 K23_contig_12, whole genome shotgun sequence (135882 bp)
Overview 1 RT 1: 31428-38809 bp Neighborhood of RT #1 [31428, 38826] PRK09692 Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 31428-32666 bp Feature: domain Description: PRK09692 Location: 31434-32616 bp Feature: domain Description: PRK09692 Location: 31434-32 616 bp Feature: gene Location: 32893-33352 bp Feature: domain Description: Integrase_1 Location: 32914-33181 bp Feature: domain Description: Integrase_1 Location: 32 914-33181 bp Feature: gene Location: 33343-35424 bp Ori: OZP38129.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33754-34198 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33754-34198 bp Feature: gene Location: 35421-38015 bp Ori: OZP38130.1 Feature: domain Description: FimD Location: 35463-38004 bp Feature: domain Description: FimD Location: 35463-38004 bp Feature: gene Location: 38062-38826 bp Ori: OZP38131.1 Feature: domain Description: FimC Location: 38107-38809 bp Feature: domain Description: FimC Location: 38107-38809 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)