myRT

myRT report for GCA_002264245.1_ASM226424v1

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Seq: NPGO01000067.1 Klebsiella pneumoniae strain K4314 NODE_67_length_1892_cov_331.862, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 59-1794 bp Neighborhood of RT #1 [59, 1794] RVT-GII Feature: gene Location: 59-1543 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461-1151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461 -1 1 51 bp Feature: gene Location: 1543-1794 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NPGO01000006.1 Klebsiella pneumoniae strain K4314 NODE_6_length_263792_cov_32.6142, whole genome shotgun sequence (263792 bp)
Overview 1 RT 1: 240023-245755 bp Neighborhood of RT #1 [240023, 246285] AAA_15 RVT-Retrons STKc_PknB_like Feature: gene Location: 240023-240253 bp Feature: gene Location: 241132-243408 bp Feature: domain Description: AAA_15 Location: 241165-242173 bp Feature: domain Description: AAA_15 Location: 2 41165-2 42 173 bp Feature: gene Location: 243523-244623 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 243706-244234 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 43706-2 442 34 bp Feature: gene Location: 244870-245112 bp Feature: gene Location: 245182-246285 bp Feature: domain Description: STKc_PknB_like Location: 245314-245755 bp Feature: domain Description: STKc_PknB_like Location: 2 45314-2 45755 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, STKc_PknB_like (cd14014)

Seq: NPGO01000044.1 Klebsiella pneumoniae strain K4314 NODE_44_length_13922_cov_42.0738, whole genome shotgun sequence (13922 bp)
Overview 1 RT 1: 2883-6486 bp Neighborhood of RT #1 [2883, 6611] RVT_N RVT-GII GIIM HNHc DUF1380 Feature: gene Location: 2883-3140 bp Feature: gene Location: 3108-3283 bp Feature: gene Location: 4020-5687 bp Feature: RT Description: RVT_N Location: 4068-4305 bp Feature: RT Description: RVT_N Location: 4068-43 05 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4356-4998 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43 56-4998 bp Feature: domain Description: GIIM Note: maturase Location: 5049-5283 bp Feature: domain Description: GIIM Note: maturase Location: 5049-5283 bp Feature: domain Description: HNHc Note: nucleases Location: 5493-5652 bp Feature: domain Description: HNHc Note: nucleases Location: 5493 -5652 bp Feature: gene Location: 6001-6192 bp Feature: gene Location: 6189-6611 bp Feature: domain Description: DUF1380 Location: 6192-6486 bp Feature: domain Description: DUF13 80 Location: 6192-6486 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF1380 (pfam07128)