myRT

myRT report for GCA_002264285.1_ASM226428v1

Download annotations/find similar RTs

Seq: NPGH01000015.1 Serratia marcescens strain SE3605 NODE_15_length_120889_cov_49.5693, whole genome shotgun sequence (120889 bp)
Overview 1 RT 1: 116201-120315 bp Neighborhood of RT #1 [116201, 120315] PRK09692 RVT-Retrons Feature: gene Location: 116201-117367 bp Feature: domain Description: PRK09692 Location: 116210-117359 bp Feature: domain Description: PRK09692 Location: 1 1 621 0-1 1 7359 bp Feature: gene Location: 117404-117886 bp Feature: gene Location: 117883-118809 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 117988-118570 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 7988-1 1 8570 bp Feature: gene Location: 118796-119776 bp Feature: gene Location: 120103-120315 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-Retrons

Seq: NPGH01000010.1 Serratia marcescens strain SE3605 NODE_10_length_184065_cov_49.3821, whole genome shotgun sequence (184065 bp)
Overview 1 RT 1: 172785-178143 bp Neighborhood of RT #1 [172785, 178328] HTH_1 PBP2_DntR_like_1 PRK10819 RVT-Retrons YafY Feature: gene Location: 172785-173687 bp Feature: domain Description: HTH_1 Location: 172809-172980 bp Feature: domain Description: HTH_1 Location: 172 809-172 980 bp Feature: domain Description: PBP2_DntR_like_1 Location: 173076-173667 bp Feature: domain Description: PBP2 _DntR_like_1 Location: 173076-173667 bp Feature: gene Location: 173903-174274 bp Feature: domain Description: PRK10819 Location: 173984-174227 bp Feature: domain Description: PRK10819 Location: 173984-1742 2 7 bp Feature: gene Location: 174568-175518 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 174667-175258 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 174667-1752 58 bp Feature: gene Location: 175505-176458 bp Feature: gene Location: 177567-178328 bp Feature: domain Description: YafY Location: 177807-178143 bp Feature: domain Description: YafY Location: 177807-178143 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_1 (pfam00126), PBP2_DntR_like_1 (cd08460), PRK10819 (transport protein TonB; Provisional), RVT-Retrons, YafY (COG2378)