myRT

myRT report for GCA_002264545.1_ASM226454v1

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Seq: NPGU01000007.1 Klebsiella pneumoniae strain K1177 NODE_7_length_263792_cov_48.7786, whole genome shotgun sequence (263792 bp)
Overview 1 RT 1: 240023-245755 bp Neighborhood of RT #1 [240023, 246285] AAA_15 RVT-Retrons STKc_PknB_like Feature: gene Location: 240023-240253 bp Feature: gene Location: 241132-243408 bp Feature: domain Description: AAA_15 Location: 241165-242173 bp Feature: domain Description: AAA_1 5 Location: 241 1 65-2421 73 bp Feature: gene Location: 243523-244623 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 243706-244234 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 243706-244234 bp Feature: gene Location: 244870-245112 bp Feature: gene Location: 245182-246285 bp Feature: domain Description: STKc_PknB_like Location: 245314-245755 bp Feature: domain Description: STKc_PknB_like Location: 24531 4-245755 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, STKc_PknB_like (cd14014)

Seq: NPGU01000049.1 Klebsiella pneumoniae strain K1177 NODE_49_length_13922_cov_61.5326, whole genome shotgun sequence (13922 bp)
Overview 1 RT 1: 7312-11040 bp Neighborhood of RT #1 [7312, 11040] DUF1380 RVT_N RVT-GII GIIM HNHc Feature: gene Location: 7312-7734 bp Feature: domain Description: DUF1380 Location: 7315-7609 bp Feature: domain Description: DUF1380 Location: 7315-7609 bp Feature: gene Location: 7731-7922 bp Feature: gene Location: 8236-9903 bp Feature: RT Description: RVT_N Location: 8284-8521 bp Feature: RT Description: RVT_N Location: 82 84-852 1 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8572-9214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8572 -92 14 bp Feature: domain Description: GIIM Note: maturase Location: 9265-9499 bp Feature: domain Description: GIIM Note: maturase Location: 92 65-9499 bp Feature: domain Description: HNHc Note: nucleases Location: 9709-9868 bp Feature: domain Description: HNHc Note: nucleases Location: 9709-9868 bp Feature: gene Location: 10640-10815 bp Feature: gene Location: 10783-11040 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1380 (pfam07128), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: NPGU01000094.1 Klebsiella pneumoniae strain K1177 NODE_94_length_1892_cov_429.245, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 1-1442 bp Neighborhood of RT #1 [1, 1834] RVT-GII Feature: gene Location: 1-217 bp Feature: gene Location: 350-1834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII