myRT

myRT report for GCA_002264765.1_ASM226476v1

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Seq: NPHI01000045.1 Klebsiella pneumoniae strain K1433 NODE_45_length_10941_cov_45.928, whole genome shotgun sequence (10941 bp)
Overview 1 RT 1: 7312-10941 bp Neighborhood of RT #1 [7312, 10941] DUF1380 RVT_N RVT-GII GIIM HNHc Feature: gene Location: 7312-7734 bp Feature: domain Description: DUF1380 Location: 7315-7609 bp Feature: domain Description: DUF1 380 Location: 731 5-7609 bp Feature: gene Location: 7731-7922 bp Feature: gene Location: 8236-9903 bp Feature: RT Description: RVT_N Location: 8284-8521 bp Feature: RT Description: RVT_N Location: 8284-8521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8572-9214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8572-921 4 bp Feature: domain Description: GIIM Note: maturase Location: 9265-9499 bp Feature: domain Description: GIIM Note: maturase Location: 9265-9499 bp Feature: domain Description: HNHc Note: nucleases Location: 9709-9868 bp Feature: domain Description: HNHc Note: nucleases Location: 9709-9868 bp Feature: gene Location: 10640-10866 bp Feature: gene Location: 10815-10941 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1380 (pfam07128), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: NPHI01000007.1 Klebsiella pneumoniae strain K1433 NODE_7_length_261546_cov_36.8685, whole genome shotgun sequence (261546 bp)
Overview 1 RT 1: 17508-23770 bp Neighborhood of RT #1 [17508, 23770] STKc_PknB_like RVT-Retrons AAA_15 Feature: gene Location: 17508-18611 bp Feature: domain Description: STKc_PknB_like Location: 17640-18081 bp Feature: domain Description: STKc_PknB_like Location: 17640-18081 bp Feature: gene Location: 18681-18923 bp Feature: gene Location: 19170-20270 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 19353-19881 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 19353-19881 bp Feature: gene Location: 20385-22661 bp Feature: domain Description: AAA_15 Location: 20418-21426 bp Feature: domain Description: AAA_15 Location: 2 0418-2 142 6 bp Feature: gene Location: 23540-23770 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT STKc_PknB_like (cd14014), RVT-Retrons, AAA_15 (pfam13175)

Seq: NPHI01000064.1 Klebsiella pneumoniae strain K1433 NODE_64_length_1892_cov_269.836, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 1-1442 bp Neighborhood of RT #1 [1, 1834] RVT-GII Feature: gene Location: 1-217 bp Feature: gene Location: 350-1834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII