myRT

myRT report for GCA_002264785.1_ASM226478v1

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Seq: NPHF01000046.1 Klebsiella pneumoniae strain K3175 NODE_46_length_19822_cov_23.4394, whole genome shotgun sequence (19822 bp)
Overview 1 RT 1: 7312-11040 bp Neighborhood of RT #1 [7312, 11040] DUF1380 RVT_N RVT-GII GIIM HNHc Feature: gene Location: 7312-7734 bp Feature: domain Description: DUF1380 Location: 7315-7609 bp Feature: domain Description: DUF1 380 Location: 731 5-7609 bp Feature: gene Location: 7731-7922 bp Feature: gene Location: 8236-9903 bp Feature: RT Description: RVT_N Location: 8284-8521 bp Feature: RT Description: RVT_N Location: 8284-8521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8572-9214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8572-921 4 bp Feature: domain Description: GIIM Note: maturase Location: 9265-9499 bp Feature: domain Description: GIIM Note: maturase Location: 9265-9499 bp Feature: domain Description: HNHc Note: nucleases Location: 9709-9868 bp Feature: domain Description: HNHc Note: nucleases Location: 9709-9868 bp Feature: gene Location: 10640-10815 bp Feature: gene Location: 10783-11040 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1380 (pfam07128), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: NPHF01000006.1 Klebsiella pneumoniae strain K3175 NODE_6_length_245634_cov_26.8115, whole genome shotgun sequence (245634 bp)
Overview 1 RT 1: 240023-245306 bp Neighborhood of RT #1 [240023, 245634] AAA_15 RVT-Retrons DDE_Tnp_1_5 Feature: gene Location: 240023-240253 bp Feature: gene Location: 241132-243408 bp Feature: domain Description: AAA_15 Location: 241165-242173 bp Feature: domain Description: AAA_15 Location: 2 41165-2 42 173 bp Feature: gene Location: 243523-244623 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 243706-244234 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 43706-2 442 34 bp Feature: gene Location: 244916-245634 bp Feature: domain Description: DDE_Tnp_1_5 Location: 244973-245306 bp Feature: domain Description: DDE_Tnp_1_5 Location: 2 44973-2 45306 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, DDE_Tnp_1_5 (pfam13737)

Seq: NPHF01000081.1 Klebsiella pneumoniae strain K3175 NODE_81_length_1892_cov_267.187, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 1-1442 bp Neighborhood of RT #1 [1, 1834] RVT-GII Feature: gene Location: 1-217 bp Feature: gene Location: 350-1834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII