myRT

myRT report for GCA_002264855.1_ASM226485v1

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Seq: NPHH01000007.1 Klebsiella pneumoniae strain K2147 NODE_7_length_262126_cov_36.2447, whole genome shotgun sequence (262126 bp)
Overview 1 RT 1: 17508-23770 bp Neighborhood of RT #1 [17508, 23770] STKc_PknB_like RVT-Retrons AAA_15 Feature: gene Location: 17508-18611 bp Feature: domain Description: STKc_PknB_like Location: 17640-18081 bp Feature: domain Description: STKc_PknB_like Location: 1 7640-1 8081 bp Feature: gene Location: 18681-18923 bp Feature: gene Location: 19170-20270 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 19353-19881 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 9353-1 9881 bp Feature: gene Location: 20385-22661 bp Feature: domain Description: AAA_15 Location: 20418-21426 bp Feature: domain Description: AAA_1 5 Location: 2041 8-21 426 bp Feature: gene Location: 23540-23770 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT STKc_PknB_like (cd14014), RVT-Retrons, AAA_15 (pfam13175)

Seq: NPHH01000074.1 Klebsiella pneumoniae strain K2147 NODE_74_length_2470_cov_94.9014, whole genome shotgun sequence (2470 bp)
Overview 1 RT 1: 93-1725 bp Neighborhood of RT #1 [93, 1760] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 93-1760 bp Feature: RT Description: RVT_N Location: 141-378 bp Feature: RT Description: RVT_N Location: 141-378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 429-1071 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 9-1071 bp Feature: domain Description: GIIM Note: maturase Location: 1122-1356 bp Feature: domain Description: GIIM Note: maturase Location: 112 2 -1356 bp Feature: domain Description: HNHc Note: nucleases Location: 1566-1725 bp Feature: domain Description: HNHc Note: nucleases Location: 1566-172 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: NPHH01000077.1 Klebsiella pneumoniae strain K2147 NODE_77_length_1892_cov_390.801, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 1-1442 bp Neighborhood of RT #1 [1, 1834] RVT-GII Feature: gene Location: 1-217 bp Feature: gene Location: 350-1834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII