myRT

myRT report for GCA_002265015.1_ASM226501v1

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Seq: NPHN01000010.1 Klebsiella pneumoniae strain K3657 NODE_10_length_185913_cov_38.3078, whole genome shotgun sequence (185913 bp)
Overview 1 RT 1: 17507-23769 bp Neighborhood of RT #1 [17507, 23769] STKc_PknB_like RVT-Retrons AAA_15 Feature: gene Location: 17507-18610 bp Feature: domain Description: STKc_PknB_like Location: 17639-18080 bp Feature: domain Description: STKc_PknB_like Location: 1 7639-1 8080 bp Feature: gene Location: 18680-18922 bp Feature: gene Location: 19169-20269 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 19352-19880 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 9352-1 9880 bp Feature: gene Location: 20384-22660 bp Feature: domain Description: AAA_15 Location: 20417-21425 bp Feature: domain Description: AAA_1 5 Location: 2041 7-21 425 bp Feature: gene Location: 23539-23769 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT STKc_PknB_like (cd14014), RVT-Retrons, AAA_15 (pfam13175)

Seq: NPHN01000052.1 Klebsiella pneumoniae strain K3657 NODE_52_length_13916_cov_85.0501, whole genome shotgun sequence (13916 bp)
Overview 1 RT 1: 2877-6480 bp Neighborhood of RT #1 [2877, 6605] RVT_N RVT-GII GIIM HNHc DUF1380 Feature: gene Location: 2877-3134 bp Feature: gene Location: 3102-3277 bp Feature: gene Location: 4014-5681 bp Feature: RT Description: RVT_N Location: 4062-4299 bp Feature: RT Description: RVT_N Location: 4062 -42 99 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4350-4992 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4350-4992 bp Feature: domain Description: GIIM Note: maturase Location: 5043-5277 bp Feature: domain Description: GIIM Note: maturase Location: 5043-52 77 bp Feature: domain Description: HNHc Note: nucleases Location: 5487-5646 bp Feature: domain Description: HNHc Note: nucleases Location: 5487-5646 bp Feature: gene Location: 5995-6186 bp Feature: gene Location: 6183-6605 bp Feature: domain Description: DUF1380 Location: 6186-6480 bp Feature: domain Description: DUF1380 Location: 6186-6480 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF1380 (pfam07128)

Seq: NPHN01000084.1 Klebsiella pneumoniae strain K3657 NODE_84_length_1615_cov_406.016, whole genome shotgun sequence (1615 bp)
Overview 1 RT 1: 1-1517 bp Neighborhood of RT #1 [1, 1517] RVT-GII Feature: gene Location: 1-1266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 403-1093 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 403 -1093 bp Feature: gene Location: 1266-1517 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII