myRT

myRT report for GCA_002265325.1_ASM226532v1

Download annotations/find similar RTs

Seq: NOJB01000018.1 Vibrio vulnificus strain WAPHLVBRA00007 NODE_18_length_57931_cov_55.7935, whole genome shotgun sequence (57931 bp)
Overview 1 RT 1: 17476-19498 bp Neighborhood of RT #1 [17476, 19653] HTH_XRE RVT-Retrons ParE arc_metj Feature: gene Location: 17476-17661 bp Feature: gene Location: 17704-18000 bp Feature: domain Description: HTH_XRE Location: 17722-17890 bp Feature: domain Description: HTH_XRE Location: 1 7722-1 7890 bp Feature: gene Location: 17987-18946 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 18149-18635 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 81 49-1 8635 bp Feature: gene Location: 19094-19372 bp Feature: domain Description: ParE Location: 19100-19367 bp Feature: domain Description: ParE Location: 1 91 00-1 9367 bp Feature: gene Location: 19369-19653 bp Feature: domain Description: arc_metj Location: 19381-19498 bp Feature: domain Description: arc_metj Location: 1 9381 -1 9498 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, ParE (COG3668), arc_metj (LOAD_arc_metj)

Seq: NOJB01000006.1 Vibrio vulnificus strain WAPHLVBRA00007 NODE_6_length_262265_cov_59.1386, whole genome shotgun sequence (262265 bp)
Overview 1 RT 1: 174918-179593 bp Neighborhood of RT #1 [174918, 179593] TIGR02646 COG3950 RVT-Retrons COG4190 Feature: gene Location: 174918-175586 bp Feature: domain Description: TIGR02646 Location: 174984-175416 bp Feature: domain Description: TIGR02 646 Location: 174984-175416 bp Feature: gene Location: 175590-177272 bp Feature: domain Description: COG3950 Location: 175818-177183 bp Feature: domain Description: COG3950 Location: 175818-177183 bp Feature: gene Location: 177265-178188 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 177367-177949 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 177367-177949 bp Feature: gene Location: 178844-179230 bp Feature: domain Description: COG4190 Location: 178859-179189 bp Feature: domain Description: COG4190 Location: 178859-179189 bp Feature: gene Location: 179310-179593 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, COG4190 (Predicted transcriptional regulator )