myRT

myRT report for GCA_002265345.1_ASM226534v1

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Seq: NOJC01000006.1 Vibrio vulnificus strain WAPHLVBRA00006 NODE_6_length_262489_cov_47.6616, whole genome shotgun sequence (262489 bp)
Overview 1 RT 1: 175142-179817 bp Neighborhood of RT #1 [175142, 179817] TIGR02646 COG3950 RVT-Retrons COG4190 Feature: gene Location: 175142-175810 bp Feature: domain Description: TIGR02646 Location: 175208-175640 bp Feature: domain Description: TIGR02646 Location: 1 75208-1 75640 bp Feature: gene Location: 175814-177496 bp Feature: domain Description: COG3950 Location: 176042-177407 bp Feature: domain Description: COG3950 Location: 1 76042-1 77407 bp Feature: gene Location: 177489-178412 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 177591-178173 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 77591 -1 781 73 bp Feature: gene Location: 179068-179454 bp Feature: domain Description: COG4190 Location: 179083-179413 bp Feature: domain Description: COG41 90 Location: 1 79083-1 7941 3 bp Feature: gene Location: 179534-179817 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, COG4190 (Predicted transcriptional regulator )

Seq: NOJC01000001.1 Vibrio vulnificus strain WAPHLVBRA00006 NODE_1_length_772066_cov_42.4468, whole genome shotgun sequence (772066 bp)
Overview 1 RT 1: 731611-733633 bp Neighborhood of RT #1 [731611, 733788] HTH_XRE RVT-Retrons ParE arc_metj Feature: gene Location: 731611-731796 bp Feature: gene Location: 731839-732135 bp Feature: domain Description: HTH_XRE Location: 731857-732025 bp Feature: domain Description: HTH_XRE Location: 731857-732 02 5 bp Feature: gene Location: 732122-733081 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 732284-732770 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 732 2 84-732 770 bp Feature: gene Location: 733229-733507 bp Feature: domain Description: ParE Location: 733235-733502 bp Feature: domain Description: ParE Location: 7332 35-733502 bp Feature: gene Location: 733504-733788 bp Feature: domain Description: arc_metj Location: 733516-733633 bp Feature: domain Description: arc_metj Location: 733516-733633 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, ParE (COG3668), arc_metj (LOAD_arc_metj)